当前解析结果
SmilChr01G003581| 统一新 Gene ID | SmilChr01G003581 |
|---|---|
| 名称 | SmilChr01G003581 |
| 描述 | receptor-like protein kinase ANXUR2 |
| 染色体 / SeqID | Chr01 / NC_080387.1 |
| 坐标与链方向 | 54376761 - 54378672 / - |
| NCBI Gene ID | LOC130994492 |
|---|---|
| GeneID | 130994492 |
| locus_tag | - |
| NCBI Name | LOC130994492 |
| 原始查询 | SmilChr01G003581 |
| 来源 | GFF basic annotation; NCBI GO GAF; Arabidopsis/Rice homolog |
|---|---|
| 描述 | receptor-like protein kinase ANXUR2 |
| 产物 | receptor-like protein kinase ANXUR2 |
| Arabidopsis | AT3G09830 (AT3G09830)Protein kinase superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:820141] identity=68.2; qcov=0.475; evalue=1.29e-24; confidence=medium |
| Rice | Os02g0819600 (OsRLCK88)- identity=65.1; qcov=0.453; evalue=5.42e-23; confidence=medium |
| GO | GO:0004672 (protein kinase activity); GO:0005524 (ATP binding); GO:0006468 (protein phosphorylation) |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130994492 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Cytoplasm | 细胞质 | 0.80000 | XP_057775520.1 |
| 2 | Cytosol | 细胞质基质 | 0.40000 | XP_057775520.1 |
| 3 | Nucleus | 细胞核 | 0.00000 | XP_057775520.1 |
| 4 | Chromosome | 染色体 | 0.00000 | XP_057775520.1 |
| 5 | Centromere | 着丝粒 | 0.00000 | XP_057775520.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr1:54377506 |
CA |
* |
1bp_deletion | CDS_variant | 2 | B112,B66 |
Chr1:54377698 |
C |
T |
EMS_canonical_SNV | stop_gained | 10 | B125,B26,B3,B47,B51,B59,C15,C41,C56,C76 |
Chr1:54378327 |
G |
A |
EMS_canonical_SNV | stop_gained | 6 | B109,B13,B35,B60,B72,C45 |
Chr1:54378331 |
GA |
G |
1bp_deletion | frameshift_variant | 77 | A14,A15,A16,A25,A8,B102,B114,B118,B119,B120,B123,B125,B128,B129,B13,B130,B136,B137,B139,B14,B20,B23,B24,B32,B33,B34,B35,B37,B45,B46,B50,B52,B53,B6,B61,B64,B66,B75,B78,B81,B84,B85,B87,B93,C10,C27,C28,C3,C30,C33,C35,C37,C38,C39,C5,C50,C54,C56,C57,C6,C61,C63,C64,C66,C67,C7,C71,C72,C80,C81,C83,C87,D10,D11,D3,D6,D8 |
Chr1:54378345 |
AT |
A |
1bp_deletion | frameshift_variant | 1 | B44 |
Chr1:54378345 |
AT |
A |
1bp_deletion | CDS_variant | 1 | B44 |
Chr1:54378361 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | D10 |
Chr1:54378372 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B119,D3 |
Chr1:54378390 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | B115,B53,C25,D7 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
7 records
下载 cDNA FASTA2 records
下载 CDS FASTA2 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。