当前解析结果
SmilChr01G003657| 统一新 Gene ID | SmilChr01G003657 |
|---|---|
| 名称 | SmilChr01G003657 |
| 描述 | uncharacterized SmilChr01G003657 |
| 染色体 / SeqID | Chr01 / NC_080387.1 |
| 坐标与链方向 | 55011333 - 55013487 / + |
| NCBI Gene ID | LOC130994881 |
|---|---|
| GeneID | 130994881 |
| locus_tag | - |
| NCBI Name | LOC130994881 |
| 原始查询 | SmilChr01G003657 |
| 来源 | GFF basic annotation; NCBI GO GAF; KEGG smil; Pfam-A/HMMER; Arabidopsis/Rice homolog |
|---|---|
| 描述 | Hypoxanthine-guanine phosphoribosyltransferase [Source:NCBI gene (formerly Entrezgene);Acc:843505]; symbol=HGPT; hit=AT1G71750; species=arabidopsis; confidence=high |
| 产物 | Hypoxanthine-guanine phosphoribosyltransferase [Source:NCBI gene (formerly Entrezgene);Acc:843505]; symbol=HGPT; hit=AT1G71750; species=arabidopsis; confidence=high |
| Arabidopsis | AT1G71750 (HGPT)Hypoxanthine-guanine phosphoribosyltransferase [Source:NCBI gene (formerly Entrezgene);Acc:843505] identity=67.9; qcov=1; evalue=1.01e-93; confidence=high |
| Rice | Os05g0182201- identity=66.8; qcov=0.968; evalue=1.02e-88; confidence=high |
| GO | GO:0000287 (magnesium ion binding); GO:0004422 (hypoxanthine phosphoribosyltransferase activity); GO:0006166 (purine ribonucleoside salvage); GO:0006178 (guanine salvage); GO:0032263 (GMP salvage); GO:0032264 (IMP salvage); GO:0046100 (hypoxanthine metabolic process) |
| KEGG | smil00230 (Purine metabolism - Salvia miltiorrhiza (redroot sage)); smil01100 (Metabolic pathways - Salvia miltiorrhiza (redroot sage)); smil01110 (Biosynthesis of secondary metabolites - Salvia miltiorrhiza (redroot sage)); smil01232 (Nucleotide metabolism - Salvia miltiorrhiza (redroot sage)) |
| Pfam | PF00156 (Pribosyltran) |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130994881 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Cytoplasm | 细胞质 | 1.00000 | XP_057775985.1 |
| 2 | Nucleus | 细胞核 | 0.80000 | XP_057775985.1 |
| 3 | Cytosol | 细胞质基质 | 0.60000 | XP_057775985.1 |
| 4 | Chromosome | 染色体 | 0.00000 | XP_057775985.1 |
| 5 | Centromere | 着丝粒 | 0.00000 | XP_057775985.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr1:55011643 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | B78,B79,C39,D1 |
Chr1:55012389 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B107,B26 |
结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan;位置为对应蛋白序列上的氨基酸坐标。
XP_057775985.1PF00156
Pribosyltran 14-168 aa
| Protein ID | 来源 | 结构域编号 | 结构域名称 | 类型 | 起始 aa | 终止 aa | E-value | Score | 说明 |
|---|---|---|---|---|---|---|---|---|---|
XP_057775985.1 |
Pfam | PF00156 |
Pribosyltran | Domain | 14 | 168 | 1.1e-26 | 93.7 | Phosphoribosyl transferase domain |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。