当前解析结果
SmilChr01G003659| 统一新 Gene ID | SmilChr01G003659 |
|---|---|
| 名称 | SmilChr01G003659 |
| 描述 | uncharacterized SmilChr01G003659 |
| 染色体 / SeqID | Chr01 / NC_080387.1 |
| 坐标与链方向 | 55019597 - 55020369 / - |
| NCBI Gene ID | LOC130994904 |
|---|---|
| GeneID | 130994904 |
| locus_tag | - |
| NCBI Name | LOC130994904 |
| 原始查询 | SmilChr01G003659 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | nucleolar protein [Source:NCBI gene (formerly Entrezgene);Acc:843504]; symbol=AT1G71740; hit=AT1G71740; species=arabidopsis; confidence=medium |
| 产物 | nucleolar protein [Source:NCBI gene (formerly Entrezgene);Acc:843504]; symbol=AT1G71740; hit=AT1G71740; species=arabidopsis; confidence=medium |
| Arabidopsis | AT1G71740 (AT1G71740)nucleolar protein [Source:NCBI gene (formerly Entrezgene);Acc:843504] identity=48.1; qcov=1.02; evalue=4.92e-31; confidence=medium |
| Rice | Os02g0210900- identity=58.7; qcov=0.365; evalue=6.84e-12; confidence=low |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130994904 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Cell membrane | 细胞膜 | 0.60000 | XP_057776022.1 |
| 2 | Cytoplasm | 细胞质 | 0.20000 | XP_057776022.1 |
| 3 | Endoplasmic reticulum | 内质网 | 0.20000 | XP_057776022.1 |
| 4 | Nucleus | 细胞核 | 0.00000 | XP_057776022.1 |
| 5 | Chromosome | 染色体 | 0.00000 | XP_057776022.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr1:55019797 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B102,B64,B75 |
Chr1:55019801 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B18 |
Chr1:55019849 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B79,C39,D1 |
Chr1:55019972 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B2 |
Chr1:55019974 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | A20,B12,B82,C45,C9 |
Chr1:55020008 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B83,C59,C61 |
Chr1:55020109 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B2 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。