Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr01G003666`

染色体: Chr01 坐标: 55080249-55087934 链方向: - 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr01G003666`
名称	SmilChr01G003666
描述	BTB/POZ domain-containing protein At2g30600
染色体 / SeqID	Chr01 / NC_080387.1
坐标与链方向	55080249 - 55087934 / `-`

ID 对照

NCBI Gene ID	`LOC130994929`
GeneID	`130994929`
locus_tag	`-`
NCBI Name	`LOC130994929`
原始查询	`SmilChr01G003666`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; NCBI GO GAF; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	BTB/POZ domain-containing protein At2g30600
产物	BTB/POZ domain-containing protein At2g30600
Arabidopsis	`AT2G30600` (AT2G30600) BTB/POZ domain-containing protein [Source:NCBI gene (formerly Entrezgene);Acc:817610] identity=63.5; qcov=1; evalue=0; confidence=high
Rice	`Os05g0345500` - identity=56.1; qcov=1; evalue=0; confidence=high
GO	GO:0005515 (protein binding)
KEGG	-
Pfam	PF00651 (BTB); PF00754 (F5_F8_type_C); PF07707 (BACK); PF12248 (Methyltransf_FA)
InterPro	-
eggNOG	-
NR	GeneID:130994929

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Cytoplasm	细胞质	1.00000	`XP_057776080.1`
2	Cytosol	细胞质基质	1.00000	`XP_057776080.1`
3	Nucleus	细胞核	0.40000	`XP_057776080.1`
4	Chromosome	染色体	0.00000	`XP_057776080.1`
5	Centromere	着丝粒	0.00000	`XP_057776080.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr1:55080430`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	A8
`Chr1:55080447`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	D10
`Chr1:55080486`	`G`	`A`	EMS_canonical_SNV	CDS_variant	4	B122,B131,C20,D4
`Chr1:55080510`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B5
`Chr1:55080534`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	A19,C58
`Chr1:55080724`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	A10
`Chr1:55080974`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B100
`Chr1:55081204`	`C`	`T`	EMS_canonical_SNV	CDS_variant	3	B100,C2,C48
`Chr1:55081251`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	A15,B106
`Chr1:55081377`	`C`	`T`	EMS_canonical_SNV	CDS_variant	4	B125,B90,B92,D6
`Chr1:55081447`	`GT`	`G`	1bp_deletion	frameshift_variant	1	C73
`Chr1:55081447`	`GT`	`G`	1bp_deletion	CDS_variant	1	C73

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057776080.1

807 aa

404

807

Methyltransf_FA

BTB

BACK

F5_F8_type_C

PF12248 Methyltransf_FA 14-155 aa PF00651 BTB 197-295 aa PF00651 BTB 338-453 aa PF07707 BACK 465-532 aa PF00754 F5_F8_type_C 664-784 aa

XP_057776089.1

807 aa

404

807

Methyltransf_FA

BTB

BACK

F5_F8_type_C

PF12248 Methyltransf_FA 14-155 aa PF00651 BTB 197-295 aa PF00651 BTB 338-453 aa PF07707 BACK 465-532 aa PF00754 F5_F8_type_C 664-784 aa

XP_057776099.1

807 aa

404

807

Methyltransf_FA

BTB

BACK

F5_F8_type_C

PF12248 Methyltransf_FA 14-155 aa PF00651 BTB 197-295 aa PF00651 BTB 338-453 aa PF07707 BACK 465-532 aa PF00754 F5_F8_type_C 664-784 aa

XP_057776107.1

807 aa

404

807

Methyltransf_FA

BTB

BACK

F5_F8_type_C

PF12248 Methyltransf_FA 14-155 aa PF00651 BTB 197-295 aa PF00651 BTB 338-453 aa PF07707 BACK 465-532 aa PF00754 F5_F8_type_C 664-784 aa

XP_057776118.1

807 aa

404

807

Methyltransf_FA

BTB

BACK

F5_F8_type_C

PF12248 Methyltransf_FA 14-155 aa PF00651 BTB 197-295 aa PF00651 BTB 338-453 aa PF07707 BACK 465-532 aa PF00754 F5_F8_type_C 664-784 aa

XP_057776126.1

807 aa

404

807

Methyltransf_FA

BTB

BACK

F5_F8_type_C

PF12248 Methyltransf_FA 14-155 aa PF00651 BTB 197-295 aa PF00651 BTB 338-453 aa PF07707 BACK 465-532 aa PF00754 F5_F8_type_C 664-784 aa

XP_057776135.1

807 aa

404

807

Methyltransf_FA

BTB

BACK

F5_F8_type_C

PF12248 Methyltransf_FA 14-155 aa PF00651 BTB 197-295 aa PF00651 BTB 338-453 aa PF07707 BACK 465-532 aa PF00754 F5_F8_type_C 664-784 aa

Protein ID	来源	结构域编号	结构域名称	类型	起始 aa	终止 aa	E-value	Score	说明
`XP_057776080.1`	Pfam	`PF12248`	Methyltransf_FA	Domain	14	155	5.6e-30	104.6	Farnesoic acid 0-methyl transferase
`XP_057776080.1`	Pfam	`PF00651`	BTB	Domain	197	295	7.5e-30	104.1	BTB/POZ domain
`XP_057776080.1`	Pfam	`PF00651`	BTB	Domain	338	453	7.5e-30	104.1	BTB/POZ domain
`XP_057776080.1`	Pfam	`PF07707`	BACK	Domain	465	532	4.3e-07	30.7	BTB And C-terminal Kelch
`XP_057776080.1`	Pfam	`PF00754`	F5_F8_type_C	Domain	664	784	5e-10	40.3	F5/8 type C domain
`XP_057776089.1`	Pfam	`PF12248`	Methyltransf_FA	Domain	14	155	5.6e-30	104.6	Farnesoic acid 0-methyl transferase
`XP_057776089.1`	Pfam	`PF00651`	BTB	Domain	197	295	7.5e-30	104.1	BTB/POZ domain
`XP_057776089.1`	Pfam	`PF00651`	BTB	Domain	338	453	7.5e-30	104.1	BTB/POZ domain
`XP_057776089.1`	Pfam	`PF07707`	BACK	Domain	465	532	4.3e-07	30.7	BTB And C-terminal Kelch
`XP_057776089.1`	Pfam	`PF00754`	F5_F8_type_C	Domain	664	784	5e-10	40.3	F5/8 type C domain
`XP_057776099.1`	Pfam	`PF12248`	Methyltransf_FA	Domain	14	155	5.6e-30	104.6	Farnesoic acid 0-methyl transferase
`XP_057776099.1`	Pfam	`PF00651`	BTB	Domain	197	295	7.5e-30	104.1	BTB/POZ domain
`XP_057776099.1`	Pfam	`PF00651`	BTB	Domain	338	453	7.5e-30	104.1	BTB/POZ domain
`XP_057776099.1`	Pfam	`PF07707`	BACK	Domain	465	532	4.3e-07	30.7	BTB And C-terminal Kelch
`XP_057776099.1`	Pfam	`PF00754`	F5_F8_type_C	Domain	664	784	5e-10	40.3	F5/8 type C domain
`XP_057776107.1`	Pfam	`PF12248`	Methyltransf_FA	Domain	14	155	5.6e-30	104.6	Farnesoic acid 0-methyl transferase
`XP_057776107.1`	Pfam	`PF00651`	BTB	Domain	197	295	7.5e-30	104.1	BTB/POZ domain
`XP_057776107.1`	Pfam	`PF00651`	BTB	Domain	338	453	7.5e-30	104.1	BTB/POZ domain
`XP_057776107.1`	Pfam	`PF07707`	BACK	Domain	465	532	4.3e-07	30.7	BTB And C-terminal Kelch
`XP_057776107.1`	Pfam	`PF00754`	F5_F8_type_C	Domain	664	784	5e-10	40.3	F5/8 type C domain
`XP_057776118.1`	Pfam	`PF12248`	Methyltransf_FA	Domain	14	155	5.6e-30	104.6	Farnesoic acid 0-methyl transferase
`XP_057776118.1`	Pfam	`PF00651`	BTB	Domain	197	295	7.5e-30	104.1	BTB/POZ domain
`XP_057776118.1`	Pfam	`PF00651`	BTB	Domain	338	453	7.5e-30	104.1	BTB/POZ domain
`XP_057776118.1`	Pfam	`PF07707`	BACK	Domain	465	532	4.3e-07	30.7	BTB And C-terminal Kelch
`XP_057776118.1`	Pfam	`PF00754`	F5_F8_type_C	Domain	664	784	5e-10	40.3	F5/8 type C domain
`XP_057776126.1`	Pfam	`PF12248`	Methyltransf_FA	Domain	14	155	5.6e-30	104.6	Farnesoic acid 0-methyl transferase
`XP_057776126.1`	Pfam	`PF00651`	BTB	Domain	197	295	7.5e-30	104.1	BTB/POZ domain
`XP_057776126.1`	Pfam	`PF00651`	BTB	Domain	338	453	7.5e-30	104.1	BTB/POZ domain
`XP_057776126.1`	Pfam	`PF07707`	BACK	Domain	465	532	4.3e-07	30.7	BTB And C-terminal Kelch
`XP_057776126.1`	Pfam	`PF00754`	F5_F8_type_C	Domain	664	784	5e-10	40.3	F5/8 type C domain
`XP_057776135.1`	Pfam	`PF12248`	Methyltransf_FA	Domain	14	155	5.6e-30	104.6	Farnesoic acid 0-methyl transferase
`XP_057776135.1`	Pfam	`PF00651`	BTB	Domain	197	295	7.5e-30	104.1	BTB/POZ domain
`XP_057776135.1`	Pfam	`PF00651`	BTB	Domain	338	453	7.5e-30	104.1	BTB/POZ domain
`XP_057776135.1`	Pfam	`PF07707`	BACK	Domain	465	532	4.3e-07	30.7	BTB And C-terminal Kelch
`XP_057776135.1`	Pfam	`PF00754`	F5_F8_type_C	Domain	664	784	5e-10	40.3	F5/8 type C domain

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

8 records

下载 cDNA FASTA

XR_009091948.1
ACTCAAATTATTATATATCAAAGATTTTTCTTCACTGTTGCATTATAAAAACGATAATCTGCAAAAATTCCCAGTTATTCAGTCACAACCGCCATACTTCTCCCATATCCCCATTTTTATATATATCAGATTCATTCACCTATCTATATATTATTTCATTTTTTCTACATCTATAATTTGCGAACTTGAACTTATCCAGCAAGAAAATCAAGTTATTTCCTTTCACTGCAGAGGAGCTGAACAAGGGGGTAGACGAAGGG...

XM_057920097.1
ACTCAAATTATTATATATCAAAGATTTTTCTTCACTGTTGCATTATAAAAACGATAATCTGCAAAAATTCCCAGTTATTCAGTCACAACCGCCATACTTCTCCCATATCCCCATTTTTATATATATCAGATTCATTCACCTATCTATATATTATTTCATTTTTTCTACATCTATAATTTGCGAACTTGAACTTATCCAGCAAGAAAATCAAGTTATTTCCTTTCACTGCAGAGGAGCTGAACAAGGGGGTAGACGAAGGG...

CDS

7 records

下载 CDS FASTA

LOC130994929
ATGGAAAAGAAGCAGAAGAAGTTCCTTACTGTGGCACCGTTTGAGTGTGCTTGGCACGACAACTTGAGGTTCAAGGAAGCAGGTAGGGGCTGTGTTGCGTTTGATGCCTTCGCACACAATGATGTCACGGTCGTCTTCCGGGAAAAAACGGGCAGCCAGCATTACCATTACAAAAGGGATAATAGTCCGCATTACACAGTGATTATAGGTAGCCACAGAAATAAAAGGTTGAATATCGAGGTCGATGGGAAGACAGTTGT...

Protein

7 records

下载 Protein FASTA

XP_057776080.1
MEKKQKKFLTVAPFECAWHDNLRFKEAGRGCVAFDAFAHNDVTVVFREKTGSQHYHYKRDNSPHYTVIIGSHRNKRLNIEVDGKTVVDVAGVDLYCSSAFQSYWISIYDGLISIGKGRYPFQNLVFQWLDSNPNCSVQYVGLSSWDRHVGYRNINVMPLKQNHISLWKHVDFREYDGTEDADEELEEDIGDYENWGLENFLESWELSDVFFIVGQEERAVPAHKVILAASGSFSLSTREEDIIHLQDVCYATLHALLEYI...

XP_057776089.1
MEKKQKKFLTVAPFECAWHDNLRFKEAGRGCVAFDAFAHNDVTVVFREKTGSQHYHYKRDNSPHYTVIIGSHRNKRLNIEVDGKTVVDVAGVDLYCSSAFQSYWISIYDGLISIGKGRYPFQNLVFQWLDSNPNCSVQYVGLSSWDRHVGYRNINVMPLKQNHISLWKHVDFREYDGTEDADEELEEDIGDYENWGLENFLESWELSDVFFIVGQEERAVPAHKVILAASGSFSLSTREEDIIHLQDVCYATLHALLEYI...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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