Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID,以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因,再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。
示例

当前解析结果

SmilChr01G003877

染色体: Chr01 坐标: 57063543-57077085 链方向: - 类型: protein_coding

基本信息

统一新 Gene IDSmilChr01G003877
名称SmilChr01G003877
描述uncharacterized SmilChr01G003877
染色体 / SeqIDChr01 / NC_080387.1
坐标与链方向57063543 - 57077085 / -

ID 对照

NCBI Gene IDLOC131010481
GeneID131010481
locus_tag-
NCBI NameLOC131010481
原始查询SmilChr01G003877

查看完整 ID 对照表

功能注释

来源GFF basic annotation; NCBI GO GAF; KEGG smil; Arabidopsis/Rice homolog
描述4-phosphopantetheine adenylyltransferase [Source:NCBI gene (formerly Entrezgene);Acc:816341]; symbol=COAD; hit=AT2G18250; species=arabidopsis; confidence=weak
产物4-phosphopantetheine adenylyltransferase [Source:NCBI gene (formerly Entrezgene);Acc:816341]; symbol=COAD; hit=AT2G18250; species=arabidopsis; confidence=weak
ArabidopsisAT2G18250 (COAD)
4-phosphopantetheine adenylyltransferase [Source:NCBI gene (formerly Entrezgene);Acc:816341]
identity=75; qcov=0.285; evalue=3.1e-39; confidence=weak
RiceOs02g0134000
-
identity=70.2; qcov=0.304; evalue=5.92e-37; confidence=low
GOGO:0004140 (dephospho-CoA kinase activity); GO:0004595 (pantetheine-phosphate adenylyltransferase activity); GO:0015937 (coenzyme A biosynthetic process)
KEGGsmil00770 (Pantothenate and CoA biosynthesis - Salvia miltiorrhiza (redroot sage)); smil01100 (Metabolic pathways - Salvia miltiorrhiza (redroot sage)); smil01240 (Biosynthesis of cofactors - Salvia miltiorrhiza (redroot sage))
Pfam-
InterPro-
eggNOG-
NRGeneID:131010481

打开注释模块

亚细胞定位 Top 5

Rank定位位置中文ScoreProtein ID
1 Mitochondrion 线粒体 0.60000 XP_057794003.1
2 Cytosol 细胞质基质 0.40000 XP_057794003.1
3 Nucleus 细胞核 0.00000 XP_057794003.1
4 Chromosome 染色体 0.00000 XP_057794003.1
5 Centromere 着丝粒 0.00000 XP_057794003.1

进入亚细胞定位查询

EMS 诱变突变

该基因暂未检索到已上线的精选 EMS CDS / LoF 突变,或 EMS 突变库仍在构建。

进入 EMS 突变库

预测功能结构域

当前发布数据中,此基因没有可展示的 Pfam 结构域命中。

进入结构域查询

cDNA / CDS / Protein 序列

下载基因组 DNA(仅基因区域)

每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

1 records

下载 cDNA FASTA
XM_057938020.1
ATGCCACCAGCTCCGGCAATGTGTGGAGGCCGGAGGGAAATTAATTCTATTCAAGGGCATAACAGTTTGGCAGTGTCGTTCAATAGGTTGTTTTTGGTTGCAATTGATAAAGATGTTCTCGTCCAAGATAAAGGAGTTTGGAACGGTTTAAACCAATTCGGGATAAAGCGGATAAGTGGAGATGGAAGGCAGATAACAATGGAGCATACTCATCAAAATCCGCATACAAGTTTATTGAAAAGCAAGCTGACCAAGGATGC...

CDS

1 records

下载 CDS FASTA
LOC131010481
ATGCCACCAGCTCCGGCAATGTGTGGAGGCCGGAGGGAAATTAATTCTATTCAAGGGCATAACAGTTTGGCAGTGTCGTTCAATAGGTTGTTTTTGGTTGCAATTGATAAAGATGTTCTCGTCCAAGATAAAGGAGTTTGGAACGGTTTAAACCAATTCGGGATAAAGCGGATAAGTGGAGATGGAAGGCAGATAACAATGGAGCATACTCATCAAAATCCGCATACAAGTTTATTGAAAAGCAAGCTGACCAAGGATGC...

Protein

1 records

下载 Protein FASTA
XP_057794003.1
MPPAPAMCGGRREINSIQGHNSLAVSFNRLFLVAIDKDVLVQDKGVWNGLNQFGIKRISGDGRQITMEHTHQNPHTSLLKSKLTKDALLTKCVNTFGAKSAPSKASAFYWKLFQNKIPTRHNLLKRGVFNNNNDDSFLVWICSLQSVNSELVVQVEPIVDPYGPSIVDENLEAIIVSKETYPGGLSVNKKRAERGLSQLKIEVVDLVPEESTGEKLSSTALRRMEAEKARKLQLEARLSWSPGILPLLYFLSCIPKMVRK...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。

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