当前解析结果
SmilChr01G003940| 统一新 Gene ID | SmilChr01G003940 |
|---|---|
| 名称 | SmilChr01G003940 |
| 描述 | uncharacterized SmilChr01G003940 |
| 染色体 / SeqID | Chr01 / NC_080387.1 |
| 坐标与链方向 | 57740197 - 57742405 / - |
| NCBI Gene ID | LOC130998138 |
|---|---|
| GeneID | 130998138 |
| locus_tag | - |
| NCBI Name | LOC130998138 |
| 原始查询 | SmilChr01G003940 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:841102]; symbol=AT1G45688; hit=AT1G45688; species=arabidopsis; confidence=high |
| 产物 | uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:841102]; symbol=AT1G45688; hit=AT1G45688; species=arabidopsis; confidence=high |
| Arabidopsis | AT1G45688 (AT1G45688)uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:841102] identity=65.2; qcov=1.06; evalue=9.53e-140; confidence=high |
| Rice | Os04g0689500- identity=59.5; qcov=1.02; evalue=1.27e-120; confidence=high |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130998138 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Cell membrane | 细胞膜 | 1.00000 | XP_057779557.1 |
| 2 | Nucleus | 细胞核 | 0.00000 | XP_057779557.1 |
| 3 | Chromosome | 染色体 | 0.00000 | XP_057779557.1 |
| 4 | Centromere | 着丝粒 | 0.00000 | XP_057779557.1 |
| 5 | Chromatin | 染色质 | 0.00000 | XP_057779557.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr1:57740777 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C3 |
Chr1:57740788 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B19,C74 |
Chr1:57740997 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B104 |
Chr1:57741503 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | D11 |
Chr1:57741571 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B100,B68 |
Chr1:57741843 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | A24 |
Chr1:57741858 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | A20,A22 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。