Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr01G004192`

染色体: Chr01 坐标: 60374832-60379044 链方向: + 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr01G004192`
名称	SmilChr01G004192
描述	uncharacterized SmilChr01G004192
染色体 / SeqID	Chr01 / NC_080387.1
坐标与链方向	60374832 - 60379044 / `+`

ID 对照

NCBI Gene ID	`LOC131000243`
GeneID	`131000243`
locus_tag	`-`
NCBI Name	`LOC131000243`
原始查询	`SmilChr01G004192`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; Arabidopsis/Rice homolog
描述	uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:816544]; symbol=AT2G20250; hit=AT2G20250; species=arabidopsis; confidence=low
产物	uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:816544]; symbol=AT2G20250; hit=AT2G20250; species=arabidopsis; confidence=low
Arabidopsis	`AT2G20250` (AT2G20250) uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:816544] identity=28.1; qcov=0.397; evalue=2.61e-06; confidence=low
Rice	`-` -
GO	-
KEGG	-
Pfam	-
InterPro	-
eggNOG	-
NR	GeneID:131000243

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Nucleus	细胞核	1.00000	`XP_057782029.1`
2	Nucleoplasm	核质	0.20000	`XP_057782029.1`
3	Chromosome	染色体	0.00000	`XP_057782029.1`
4	Centromere	着丝粒	0.00000	`XP_057782029.1`
5	Chromatin	染色质	0.00000	`XP_057782029.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr1:60375339`	`C`	`T`	EMS_canonical_SNV	CDS_variant	4	A22,B12,B49,B51
`Chr1:60375835`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	D11
`Chr1:60376124`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	B136,B50
`Chr1:60376134`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B16
`Chr1:60376295`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B117
`Chr1:60377055`	`G`	`A`	EMS_canonical_SNV	CDS_variant	5	B101,B140,B95,C33,C85
`Chr1:60377696`	`G`	`A`	EMS_canonical_SNV	CDS_variant	4	B21,B55,B72,C16
`Chr1:60377913`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B17
`Chr1:60378087`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	C26
`Chr1:60378315`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B18
`Chr1:60378336`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B17
`Chr1:60378445`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	C2

进入 EMS 突变库

预测功能结构域

当前发布数据中，此基因没有可展示的 Pfam 结构域命中。

进入结构域查询

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

4 records

下载 cDNA FASTA

XM_057926070.1
GAAAATGAAAATTAATGTTCTGTTTTAAATGTCCACGAAATGACAATTATGACATGGGTTGTCCATTTGGCGCCTAAATCTCTCCCTCAATTTGCCTCACTATATTAGGGTTTCACATTCAAATTGAGTTTTCAAATTATTGAGGGACAATGAGACGAAGATTCAAATCAAAAACTGGATTTCCACTTACCAAGACAACCGGAGACATCGCTCGAAATCGTGGATTCCAGAAGCCGTCTGAATTGAATAAGGCCAAGAGA...

XM_057926046.1
TGGGTTGTCCATTTGGCGCCTAAATCTCTCCCTCAATTTGCCTCACTATATTAGGGTTTCACATTCAAATTGAGTTTTCAAATTATTGAGGGACAATGAGACGAAGATTCAAATCAAAAACTGGATTTCCACTTACCAAGACAACCGGAGACATCGCTCGAAATCGTGGATTCCAGAAGCCGTCTGAATTGAATAAGGCCAAGAGAGTGAGATTAGCCGATGCTGAAACAGATGCTTCTTCCGGAGGCCATGAAGCAGAT...

CDS

4 records

下载 CDS FASTA

LOC131000243
ATGAGACGAAGATTCAAATCAAAAACTGGATTTCCACTTACCAAGACAACCGGAGACATCGCTCGAAATCGTGGATTCCAGAAGCCGTCTGAATTGAATAAGGCCAAGAGAGTGAGATTAGCCGATGCTGAAACAGATGCTTCTTCCGGAGGCCATGAAGCAGATCAGTCTCCGAGATGTGGTGCCCCCAAGACTTCAGAATATGCATATTTTAGAAAAGTGAAGGATGGTGCTGCTAATGGTCATTTCCGTGCACTGCA...

Protein

4 records

下载 Protein FASTA

XP_057782029.1
MRRRFKSKTGFPLTKTTGDIARNRGFQKPSELNKAKRVRLADAETDASSGGHEADQSPRCGAPKTSEYAYFRKVKDGAANGHFRALHKENEQLKSSKISYLLRETNKESEELGPDIKGFNLSISGEIAGPSGRKLFVSPPVNRYDESNEFRRKELTHKTKQRSSLLTETATPVGQCLFSSQLNQATEKSENQCLEKGLFSEKRKRLRQWVSHTTSSEVEKLHQKESDLVSFLLSRLIPKVNENNDSLKEDADKSSKSLTM...

XP_057782038.1
MRRRFKSKTGFPLTKTTGDIARNRGFQKPSELNKAKRVRLADAETDASSGGHEADQSPRCGAPKTSEYAYFRKVKDGAANGHFRALHKENEQLKSSKISYLLRETNKESEELGPDIKGFNLSISGEIAGPSGLSNDAELTHKTKQRSSLLTETATPVGQCLFSSQLNQATEKSENQCLEKGLFSEKRKRLRQWVSHTTSSEVEKLHQKESDLVSFLLSRLIPKVNENNDSLKEDADKSSKSLTMCESENVEKGLSLSHKS...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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