当前解析结果
SmilChr01G004282| 统一新 Gene ID | SmilChr01G004282 |
|---|---|
| 名称 | SmilChr01G004282 |
| 描述 | uncharacterized SmilChr01G004282 |
| 染色体 / SeqID | Chr01 / NC_080387.1 |
| 坐标与链方向 | 61047483 - 61049109 / + |
| NCBI Gene ID | LOC131000991 |
|---|---|
| GeneID | 131000991 |
| locus_tag | - |
| NCBI Name | LOC131000991 |
| 原始查询 | SmilChr01G004282 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:824968]; symbol=AT3G57990; hit=AT3G57990; species=arabidopsis; confidence=high |
| 产物 | uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:824968]; symbol=AT3G57990; hit=AT3G57990; species=arabidopsis; confidence=high |
| Arabidopsis | AT3G57990 (AT3G57990)uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:824968] identity=48.7; qcov=0.963; evalue=6.17e-81; confidence=high |
| Rice | Os09g0491676- identity=40.1; qcov=0.959; evalue=1.96e-62; confidence=medium |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131000991 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Chloroplast | 叶绿体 | 0.60000 | XP_057783129.1 |
| 2 | Chloroplast membrane | 叶绿体膜 | 0.60000 | XP_057783129.1 |
| 3 | Nucleus membrane | 核膜 | 0.40000 | XP_057783129.1 |
| 4 | Mitochondrion | 线粒体 | 0.20000 | XP_057783129.1 |
| 5 | Peroxisome | 过氧化物酶体 | 0.20000 | XP_057783129.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr1:61048078 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C15 |
Chr1:61048126 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B70,C41,C52 |
Chr1:61048153 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | C1,C22,C51,C67 |
Chr1:61048248 |
TG |
T |
1bp_deletion | frameshift_variant | 7 | B103,B105,B2,C2,C21,C25,C35 |
Chr1:61048336 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | B21,B26,B30,B78 |
Chr1:61048342 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C35 |
Chr1:61048375 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | A11 |
Chr1:61048556 |
C |
T |
EMS_canonical_SNV | stop_gained | 7 | A10,A25,B82,B98,C33,C48,C8 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。