当前解析结果
SmilChr01G004322| 统一新 Gene ID | SmilChr01G004322 |
|---|---|
| 名称 | SmilChr01G004322 |
| 描述 | uncharacterized SmilChr01G004322 |
| 染色体 / SeqID | Chr01 / NC_080387.1 |
| 坐标与链方向 | 61390834 - 61391673 / + |
| NCBI Gene ID | LOC131001399 |
|---|---|
| GeneID | 131001399 |
| locus_tag | - |
| NCBI Name | LOC131001399 |
| 原始查询 | SmilChr01G004322 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | ESSS subunit of NADH:ubiquinone oxidoreductase (complex I) protein [Source:NCBI gene (formerly Entrezgene);Acc:824948]; symbol=AT3G57785; hit=AT3G57785; species=arabidopsis; confidence=high |
| 产物 | ESSS subunit of NADH:ubiquinone oxidoreductase (complex I) protein [Source:NCBI gene (formerly Entrezgene);Acc:824948]; symbol=AT3G57785; hit=AT3G57785; species=arabidopsis; confidence=high |
| Arabidopsis | AT3G57785 (AT3G57785)ESSS subunit of NADH:ubiquinone oxidoreductase (complex I) protein [Source:NCBI gene (formerly Entrezgene);Acc:824948] identity=72.6; qcov=0.93; evalue=5.81e-51; confidence=high |
| Rice | Os09g0487500- identity=85.9; qcov=0.623; evalue=2.51e-43; confidence=medium |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131001399 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Mitochondrion | 线粒体 | 1.00000 | XP_057783768.1 |
| 2 | Mitochondrion membrane | 线粒体膜 | 1.00000 | XP_057783768.1 |
| 3 | Mitochondrion inner membrane | 线粒体内膜 | 1.00000 | XP_057783768.1 |
| 4 | Nucleus | 细胞核 | 0.00000 | XP_057783768.1 |
| 5 | Chromosome | 染色体 | 0.00000 | XP_057783768.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr1:61391128 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | A19,B138,D7 |
Chr1:61391137 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B124,B66,B83 |
Chr1:61391163 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B106 |
Chr1:61391170 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | C16,D1 |
Chr1:61391183 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B31,B64 |
Chr1:61391194 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B127,D10 |
Chr1:61391195 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B22,B36,C20 |
Chr1:61391198 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B117,B13 |
Chr1:61391219 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B140,C20 |
Chr1:61391236 |
C |
T |
EMS_canonical_SNV | CDS_variant | 5 | B111,B34,B49,C12,C70 |
Chr1:61391245 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | A19 |
Chr1:61391294 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C69 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。