当前解析结果
SmilChr01G004342| 统一新 Gene ID | SmilChr01G004342 |
|---|---|
| 名称 | SmilChr01G004342 |
| 描述 | insulin-degrading enzyme-like 1, peroxisomal |
| 染色体 / SeqID | Chr01 / NC_080387.1 |
| 坐标与链方向 | 61588334 - 61597467 / + |
| NCBI Gene ID | LOC131001516 |
|---|---|
| GeneID | 131001516 |
| locus_tag | - |
| NCBI Name | LOC131001516 |
| 原始查询 | SmilChr01G004342 |
| 来源 | GFF basic annotation; NCBI GO GAF; Pfam-A/HMMER; Arabidopsis/Rice homolog |
|---|---|
| 描述 | insulin-degrading enzyme-like 1, peroxisomal |
| 产物 | insulin-degrading enzyme-like 1%2C peroxisomal |
| Arabidopsis | AT2G41790 (AT2G41790)Insulinase (Peptidase family M16) family protein [Source:NCBI gene (formerly Entrezgene);Acc:818778] identity=71.6; qcov=0.983; evalue=0; confidence=high |
| Rice | Os07g0570300- identity=66.4; qcov=0.992; evalue=0; confidence=high |
| GO | GO:0004222 (metalloendopeptidase activity); GO:0005739 (mitochondrion); GO:0005829 (cytosol); GO:0043171 (peptide catabolic process); GO:0046872 (metal ion binding); GO:0051603 (GO:0051603) |
| KEGG | - |
| Pfam | PF00675 (Peptidase_M16); PF05193 (Peptidase_M16_C); PF16187 (Peptidase_M16_M); PF22456 (PqqF-like_C_4) |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131001516 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Cytoplasm | 细胞质 | 1.00000 | XP_057783901.1 |
| 2 | Cytosol | 细胞质基质 | 1.00000 | XP_057783901.1 |
| 3 | Nucleus | 细胞核 | 0.20000 | XP_057783901.1 |
| 4 | Chromosome | 染色体 | 0.00000 | XP_057783901.1 |
| 5 | Centromere | 着丝粒 | 0.00000 | XP_057783901.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr1:61588565 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B1 |
Chr1:61588804 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B130,B83,D10 |
Chr1:61589508 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | D7 |
Chr1:61591473 |
G |
GT |
1bp_insertion | frameshift_variant | 2 | C14,C67 |
Chr1:61591473 |
G |
GT |
1bp_insertion | CDS_variant | 2 | C14,C67 |
Chr1:61593409 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B32 |
Chr1:61593814 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B104 |
Chr1:61594167 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B35 |
Chr1:61594325 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | D8 |
Chr1:61594641 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C40 |
Chr1:61594676 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B133 |
Chr1:61594911 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | C80,C84 |
结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。
XP_057783901.1PF00675
Peptidase_M16 33-166 aa
PF05193
Peptidase_M16_C 195-373 aa
PF16187
Peptidase_M16_M 380-659 aa
PF05193
Peptidase_M16_C 664-851 aa
PF22456
PqqF-like_C_4 771-870 aa
| Protein ID | 来源 | 结构域编号 | 结构域名称 | 类型 | 起始 aa | 终止 aa | E-value | Score | 说明 |
|---|---|---|---|---|---|---|---|---|---|
XP_057783901.1 |
Pfam | PF00675 |
Peptidase_M16 | Family | 33 | 166 | 7.9e-40 | 136.9 | Insulinase (Peptidase family M16) |
XP_057783901.1 |
Pfam | PF05193 |
Peptidase_M16_C | Domain | 195 | 373 | 7.3e-43 | 147.2 | Peptidase M16 inactive domain |
XP_057783901.1 |
Pfam | PF16187 |
Peptidase_M16_M | Family | 380 | 659 | 2.3e-106 | 355.8 | Middle or third domain of peptidase_M16 |
XP_057783901.1 |
Pfam | PF05193 |
Peptidase_M16_C | Domain | 664 | 851 | 7.3e-43 | 147.2 | Peptidase M16 inactive domain |
XP_057783901.1 |
Pfam | PF22456 |
PqqF-like_C_4 | Domain | 771 | 870 | 8.1e-22 | 78.0 | PQQ synthase PqqF-like, C-terminal lobe domain 4 |
每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
3 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。