Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr01G004362`

染色体: Chr01 坐标: 61807038-61813544 链方向: + 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr01G004362`
名称	SmilChr01G004362
描述	kinesin-like protein KIN-14L
染色体 / SeqID	Chr01 / NC_080387.1
坐标与链方向	61807038 - 61813544 / `+`

ID 对照

NCBI Gene ID	`LOC131001484`
GeneID	`131001484`
locus_tag	`-`
NCBI Name	`LOC131001484`
原始查询	`SmilChr01G004362`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; NCBI GO GAF; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	kinesin-like protein KIN-14L
产物	kinesin-like protein KIN-14L
Arabidopsis	`AT3G10310` (AT3G10310) P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain-containing protein [Source:NCBI gene (formerly Entrezgene);Acc:820193] identity=52.9; qcov=0.997; evalue=0; confidence=high
Rice	`Os04g0467901` (OsKCH2) - identity=46; qcov=0.732; evalue=0; confidence=high
GO	GO:0003777 (microtubule motor activity); GO:0005524 (ATP binding); GO:0007018 (microtubule-based movement); GO:0008017 (microtubule binding)
KEGG	-
Pfam	PF00225 (Kinesin); PF00307 (CH); PF16796 (Microtub_bd)
InterPro	-
eggNOG	-
NR	GeneID:131001484

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Cytoskeleton	细胞骨架	1.00000	`XP_057783859.1`
2	Spindle	Spindle	1.00000	`XP_057783859.1`
3	Spindle pole	Spindle pole	1.00000	`XP_057783865.1`
4	Centrosome	中心体	0.40000	`XP_057783859.1`
5	Phragmoplast	Phragmoplast	0.40000	`XP_057783859.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr1:61807976`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B68
`Chr1:61807997`	`G`	`A`	EMS_canonical_SNV	CDS_variant	5	B13,B38,B39,B70,C79
`Chr1:61808331`	`C`	`T`	EMS_canonical_SNV	CDS_variant	3	B2,C26,C80
`Chr1:61809033`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B32
`Chr1:61809308`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B84
`Chr1:61810771`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B93
`Chr1:61811036`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	D10
`Chr1:61811481`	`G`	`A`	EMS_canonical_SNV	CDS_variant	2	C3,C50
`Chr1:61811915`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	A11
`Chr1:61811917`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B104
`Chr1:61812145`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	A23
`Chr1:61812314`	`G`	`A`	EMS_canonical_SNV	CDS_variant	2	A13,B21

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057783859.1

1057 aa

528

1057

Microtub_bd

Kinesin

PF00307 CH 27-148 aa PF16796 Microtub_bd 367-525 aa PF00225 Kinesin 417-705 aa

XP_057783865.1

1056 aa

528

1056

Microtub_bd

Kinesin

PF00307 CH 27-148 aa PF16796 Microtub_bd 366-524 aa PF00225 Kinesin 416-704 aa

Protein ID	来源	结构域编号	结构域名称	类型	起始 aa	终止 aa	E-value	Score	说明
`XP_057783859.1`	Pfam	`PF00307`	CH	Domain	27	148	3.1e-13	50.6	Calponin homology (CH) domain
`XP_057783859.1`	Pfam	`PF16796`	Microtub_bd	Domain	367	525	3.6e-44	151.1	Microtubule binding
`XP_057783859.1`	Pfam	`PF00225`	Kinesin	Domain	417	705	1.3e-101	340.6	Kinesin motor domain
`XP_057783865.1`	Pfam	`PF00307`	CH	Domain	27	148	3.1e-13	50.6	Calponin homology (CH) domain
`XP_057783865.1`	Pfam	`PF16796`	Microtub_bd	Domain	366	524	3.6e-44	151.1	Microtubule binding
`XP_057783865.1`	Pfam	`PF00225`	Kinesin	Domain	416	704	1.3e-101	340.6	Kinesin motor domain

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

2 records

下载 cDNA FASTA

XM_057927876.1
TGTATATTAGTTTATCACACACTAACACTCACGCTCCTATTCTCGCTTCACCTCAGCTGAGATTACAATTTACAATCCAATTTTGTTCTTGATTTCTCTCTCTAAAATAAGGGGAAATTTTATTTGCATTTGTTCTCTGTCTATGTAAAGCAGGCTCAGTCGAGGAAATAAATCTTTGGATGCAGCTTTAATGGAGGATTTGCAAAGAAGAGGGACAGTGGGTGTGTTGGATTTGGCTTCGAGAAGGGCTGAAGAAGCAG...

XM_057927882.1
TGTATATTAGTTTATCACACACTAACACTCACGCTCCTATTCTCGCTTCACCTCAGCTGAGATTACAATTTACAATCCAATTTTGTTCTTGATTTCTCTCTCTAAAATAAGGGGAAATTTTATTTGCATTTGTTCTCTGTCTATGTAAAGCAGGCTCAGTCGAGGAAATAAATCTTTGGATGCAGCTTTAATGGAGGATTTGCAAAGAAGAGGGACAGTGGGTGTGTTGGATTTGGCTTCGAGAAGGGCTGAAGAAGCAG...

CDS

2 records

下载 CDS FASTA

LOC131001484
ATGGAGGATTTGCAAAGAAGAGGGACAGTGGGTGTGTTGGATTTGGCTTCGAGAAGGGCTGAAGAAGCAGCATTGAGAAGATATCAAGCAGTACATTGGCTTGATTACCTGGTGGGGCCGCTGGGAATACCAAGCCAGCCGTCAGAGAAACAGTTTATCTCTTGTTTGAGAAATGGGCTAGTCCTTTGCAACATAATCAACAAAGTTCAACCTGGCTCAGTTCCGAAGGTCATAGAGAAAACTACACCTTTACAATCACT...

Protein

2 records

下载 Protein FASTA

XP_057783859.1
MEDLQRRGTVGVLDLASRRAEEAALRRYQAVHWLDYLVGPLGIPSQPSEKQFISCLRNGLVLCNIINKVQPGSVPKVIEKTTPLQSLPWDSQPLPAYQYFENIRNFLVAVEELKLPMFDASVFERENLVEGSSTKVVDCILALKDYHEWKQMTGGFGVYKPPRSPLILNSAGRICPRTPSAVSSNSSRQLDMTGGNNKPMPSESDIRKVEDTIVKVLAEHMVGSKENIDNNLVALYRSGKVNPANFLSKILSSFEEQFRK...

XP_057783865.1
MEDLQRRGTVGVLDLASRRAEEAALRRYQAVHWLDYLVGPLGIPSQPSEKQFISCLRNGLVLCNIINKVQPGSVPKVIEKTTPLQSLPWDSQPLPAYQYFENIRNFLVAVEELKLPMFDASVFERENLVEGSSTKVVDCILALKDYHEWKQMTGGFGVYKPPRSPLILNSAGRICPRTPSAVSSNSSRQLDMTGGNNKPMPSESDIRKVEDTIVKVLAEHMVGSKENIDNNLVALYRSGKNPANFLSKILSSFEEQFRKK...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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