当前解析结果
SmilChr01G004372| 统一新 Gene ID | SmilChr01G004372 |
|---|---|
| 名称 | SmilChr01G004372 |
| 描述 | zeatin O-glucosyltransferase-like |
| 染色体 / SeqID | Chr01 / NC_080387.1 |
| 坐标与链方向 | 61925533 - 61927324 / + |
| NCBI Gene ID | LOC131001920 |
|---|---|
| GeneID | 131001920 |
| locus_tag | - |
| NCBI Name | LOC131001920 |
| 原始查询 | SmilChr01G004372 |
| 来源 | GFF basic annotation; NCBI GO GAF; KEGG smil; Pfam-A/HMMER; Arabidopsis/Rice homolog |
|---|---|
| 描述 | zeatin O-glucosyltransferase-like |
| 产物 | zeatin O-glucosyltransferase-like |
| Arabidopsis | AT3G50740 (UGT72E1)UDP-glucosyl transferase 72E1 [Source:NCBI gene (formerly Entrezgene);Acc:824238] identity=39.9; qcov=0.567; evalue=2.3e-52; confidence=medium |
| Rice | Os04g0556500 (CZOGT1)- identity=41.1; qcov=1.02; evalue=1.22e-103; confidence=medium |
| GO | GO:0008194 (UDP-glycosyltransferase activity) |
| KEGG | smil00908 (Zeatin biosynthesis - Salvia miltiorrhiza (redroot sage)); smil01110 (Biosynthesis of secondary metabolites - Salvia miltiorrhiza (redroot sage)) |
| Pfam | PF00201 (UDPGT); PF26168 (Glyco_transf_N) |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131001920 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Cytoplasm | 细胞质 | 1.00000 | XP_057784553.1 |
| 2 | Cytosol | 细胞质基质 | 1.00000 | XP_057784553.1 |
| 3 | Nucleus | 细胞核 | 0.00000 | XP_057784553.1 |
| 4 | Chromosome | 染色体 | 0.00000 | XP_057784553.1 |
| 5 | Centromere | 着丝粒 | 0.00000 | XP_057784553.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr1:61925838 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B68 |
Chr1:61925873 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | C32,C68 |
Chr1:61925905 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B5,B64 |
Chr1:61925912 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B108,C23 |
Chr1:61925956 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | A23 |
Chr1:61926051 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B129,B94,C59 |
Chr1:61926552 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B31,B47,D1 |
Chr1:61926574 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C43 |
Chr1:61926645 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | C37,C63,D9 |
Chr1:61926772 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C76 |
Chr1:61926815 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | B2,B24,B72,C70,C87 |
Chr1:61926917 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B55,B66,B97 |
结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan;位置为对应蛋白序列上的氨基酸坐标。
XP_057784553.1PF26168
Glyco_transf_N 5-236 aa
PF00201
UDPGT 247-385 aa
| Protein ID | 来源 | 结构域编号 | 结构域名称 | 类型 | 起始 aa | 终止 aa | E-value | Score | 说明 |
|---|---|---|---|---|---|---|---|---|---|
XP_057784553.1 |
Pfam | PF26168 |
Glyco_transf_N | Domain | 5 | 236 | 2.9e-65 | 221.1 | Glycosyltransferase, N-terminal domain |
XP_057784553.1 |
Pfam | PF00201 |
UDPGT | Family | 247 | 385 | 5.6e-22 | 78.9 | UDP-glucoronosyl and UDP-glucosyl transferase |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。