当前解析结果
SmilChr01G004403| 统一新 Gene ID | SmilChr01G004403 |
|---|---|
| 名称 | SmilChr01G004403 |
| 描述 | folylpolyglutamate synthase |
| 染色体 / SeqID | Chr01 / NC_080387.1 |
| 坐标与链方向 | 62138438 - 62143661 / - |
| NCBI Gene ID | LOC131001580 |
|---|---|
| GeneID | 131001580 |
| locus_tag | - |
| NCBI Name | LOC131001580 |
| 原始查询 | SmilChr01G004403 |
| 来源 | GFF basic annotation; NCBI GO GAF; KEGG smil; Arabidopsis/Rice homolog |
|---|---|
| 描述 | folylpolyglutamate synthase |
| 产物 | folylpolyglutamate synthase |
| Arabidopsis | AT3G10160 (DFC)DHFS-FPGS homolog C [Source:NCBI gene (formerly Entrezgene);Acc:820179] identity=62.7; qcov=1; evalue=0; confidence=high |
| Rice | Os03g0111100- identity=52.4; qcov=0.969; evalue=0; confidence=high |
| GO | GO:0004326 (tetrahydrofolylpolyglutamate synthase activity); GO:0005524 (ATP binding); GO:0005737 (cytoplasm); GO:0005739 (mitochondrion); GO:0005829 (cytosol); GO:0046901 (tetrahydrofolylpolyglutamate biosynthetic process) |
| KEGG | smil00790 (Folate biosynthesis - Salvia miltiorrhiza (redroot sage)); smil01100 (Metabolic pathways - Salvia miltiorrhiza (redroot sage)); smil01240 (Biosynthesis of cofactors - Salvia miltiorrhiza (redroot sage)); smil04981 (Folate transport and metabolism - Salvia miltiorrhiza (redroot sage)) |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131001580 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Mitochondrion | 线粒体 | 1.00000 | XP_057784050.1 |
| 2 | Cytoplasm | 细胞质 | 0.80000 | XP_057784094.1 |
| 3 | Mitochondrion matrix | 线粒体基质 | 0.80000 | XP_057784103.1 |
| 4 | Cytosol | 细胞质基质 | 0.60000 | XP_057784094.1 |
| 5 | Peroxisome | 过氧化物酶体 | 0.20000 | XP_057784094.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr1:62138981 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | D11 |
Chr1:62139084 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | C56,D11 |
Chr1:62139221 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | B100,B110,B132,C46 |
Chr1:62139452 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | C37,C63,D9 |
Chr1:62139481 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C48 |
Chr1:62139652 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C49 |
Chr1:62139705 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B2 |
Chr1:62139992 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B78,C5,D10 |
Chr1:62140192 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | C2,C32,C68 |
Chr1:62140776 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | C37,C63,D9 |
Chr1:62141760 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B34 |
Chr1:62142775 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | B109,B86,B9,C44 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
8 records
下载 cDNA FASTA8 records
下载 CDS FASTA8 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。