Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr01G004520`

染色体: Chr01 坐标: 63316973-63324098 链方向: + 类型: protein_coding

统一新 Gene ID	`SmilChr01G004520`
名称	SmilChr01G004520
描述	magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase, chloroplastic
染色体 / SeqID	Chr01 / NC_080387.1
坐标与链方向	63316973 - 63324098 / `+`

来源	GFF basic annotation; NCBI GO GAF; KEGG smil; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase, chloroplastic
产物	magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase%2C chloroplastic
Arabidopsis	`AT3G56940` (CRD1) dicarboxylate diiron protein, putative (Crd1) [Source:NCBI gene (formerly Entrezgene);Acc:824861] identity=84.3; qcov=1.01; evalue=0; confidence=high
Rice	`Os01g0279100` (OsCRD1) - identity=80.6; qcov=1; evalue=0; confidence=high
GO	GO:0009535 (chloroplast thylakoid membrane); GO:0015979 (photosynthesis); GO:0015995 (chlorophyll biosynthetic process); GO:0046872 (metal ion binding); GO:0048529 (magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase activity)
KEGG	smil00860 (Porphyrin metabolism - Salvia miltiorrhiza (redroot sage)); smil01100 (Metabolic pathways - Salvia miltiorrhiza (redroot sage)); smil01110 (Biosynthesis of secondary metabolites - Salvia miltiorrhiza (redroot sage))
Pfam	PF02915 (Rubrerythrin)
InterPro	-
eggNOG	-
NR	GeneID:131003537

Rank	定位位置	中文	Score	Protein ID
1	Chloroplast	叶绿体	1.00000	`XP_057786034.1`
2	Chloroplast thylakoid	类囊体	0.80000	`XP_057786034.1`
3	Chloroplast stroma	叶绿体基质	0.40000	`XP_057786034.1`
4	Chloroplast thylakoid membrane	类囊体膜	0.40000	`XP_057786034.1`
5	Chloroplast membrane	叶绿体膜	0.20000	`XP_057786034.1`

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr1:63317212`	`C`	`T`	EMS_canonical_SNV	CDS_variant	3	B26,C40,C61
`Chr1:63317420`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B122
`Chr1:63317504`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B74
`Chr1:63317576`	`G`	`A`	EMS_canonical_SNV	CDS_variant	3	B12,B139,C83
`Chr1:63318709`	`A`	`AC`	1bp_insertion	frameshift_variant	29	A22,A3,A5,B107,B108,B115,B136,B138,B20,B23,B53,B69,B77,B79,B83,B87,B9,C15,C18,C37,C39,C4,C44,C48,C60,C61,D3,D6,D7
`Chr1:63318716`	`T`	`TAC`	2bp_insertion	frameshift_variant	6	A23,B112,B25,C22,C73,C81
`Chr1:63318719`	`ACC`	`A`	2bp_deletion	frameshift_variant	6	A23,B112,B25,C22,C73,C81
`Chr1:63318736`	`A`	`AGC`	2bp_insertion	frameshift_variant	24	A13,A21,B120,B126,B13,B131,B134,B14,B21,B22,B30,B45,B95,C13,C17,C25,C32,C33,C68,C72,C74,C82,C87,D1
`Chr1:63318802`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B69
`Chr1:63318808`	`G`	`A`	EMS_canonical_SNV	CDS_variant	2	C36,C5
`Chr1:63318853`	`G`	`A`	EMS_canonical_SNV	CDS_variant	5	A4,A6,B106,C67,D10
`Chr1:63318873`	`G`	`A`	EMS_canonical_SNV	stop_gained	1	B69

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057786034.1

406 aa

203

406

Rubrerythrin