当前解析结果
SmilChr01G004528| 统一新 Gene ID | SmilChr01G004528 |
|---|---|
| 名称 | SmilChr01G004528 |
| 描述 | uncharacterized SmilChr01G004528 |
| 染色体 / SeqID | Chr01 / NC_080387.1 |
| 坐标与链方向 | 63467710 - 63473910 / - |
| NCBI Gene ID | LOC131003107 |
|---|---|
| GeneID | 131003107 |
| locus_tag | - |
| NCBI Name | LOC131003107 |
| 原始查询 | SmilChr01G004528 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | cardiomyopathy-associated protein [Source:NCBI gene (formerly Entrezgene);Acc:831659]; symbol=AT5G17910; hit=AT5G17910; species=arabidopsis; confidence=medium |
| 产物 | cardiomyopathy-associated protein [Source:NCBI gene (formerly Entrezgene);Acc:831659]; symbol=AT5G17910; hit=AT5G17910; species=arabidopsis; confidence=medium |
| Arabidopsis | AT5G17910 (AT5G17910)cardiomyopathy-associated protein [Source:NCBI gene (formerly Entrezgene);Acc:831659] identity=42; qcov=0.505; evalue=4.5e-123; confidence=medium |
| Rice | Os01g0812050- identity=40.2; qcov=0.237; evalue=5.15e-51; confidence=weak |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131003107 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Cell membrane | 细胞膜 | 0.60000 | XP_057785570.1 |
| 2 | Endoplasmic reticulum | 内质网 | 0.40000 | XP_057785570.1 |
| 3 | Cytosol | 细胞质基质 | 0.20000 | XP_057785570.1 |
| 4 | Endoplasmic reticulum membrane | 内质网膜 | 0.20000 | XP_057785570.1 |
| 5 | Nucleus | 细胞核 | 0.00000 | XP_057785570.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr1:63468065 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B11,B17 |
Chr1:63468077 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B112 |
Chr1:63468192 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B36 |
Chr1:63468244 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B81,C12 |
Chr1:63468385 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B63 |
Chr1:63468413 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B63 |
Chr1:63468414 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | A19,B112 |
Chr1:63468555 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B2,B24,C82 |
Chr1:63468559 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | D10 |
Chr1:63468607 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B50 |
Chr1:63468642 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | B44,B50,C50,C53 |
Chr1:63468655 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B36 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
3 records
下载 cDNA FASTA3 records
下载 CDS FASTA3 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。