当前解析结果
SmilChr01G004549| 统一新 Gene ID | SmilChr01G004549 |
|---|---|
| 名称 | SmilChr01G004549 |
| 描述 | uncharacterized SmilChr01G004549 |
| 染色体 / SeqID | Chr01 / NC_080387.1 |
| 坐标与链方向 | 63608236 - 63610782 / - |
| NCBI Gene ID | LOC131003762 |
|---|---|
| GeneID | 131003762 |
| locus_tag | - |
| NCBI Name | LOC131003762 |
| 原始查询 | SmilChr01G004549 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | FAR1-related sequence 3 [Source:NCBI gene (formerly Entrezgene);Acc:817253]; symbol=FRS3; hit=AT2G27110; species=arabidopsis; confidence=low |
| 产物 | FAR1-related sequence 3 [Source:NCBI gene (formerly Entrezgene);Acc:817253]; symbol=FRS3; hit=AT2G27110; species=arabidopsis; confidence=low |
| Arabidopsis | AT2G27110 (FRS3)FAR1-related sequence 3 [Source:NCBI gene (formerly Entrezgene);Acc:817253] identity=47.2; qcov=0.396; evalue=3.22e-20; confidence=low |
| Rice | Os08g0530500- identity=39.2; qcov=0.399; evalue=2.76e-17; confidence=low |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131003762 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus | 细胞核 | 1.00000 | XP_057786296.1 |
| 2 | Nucleoplasm | 核质 | 1.00000 | XP_057786310.1 |
| 3 | Cytoplasm | 细胞质 | 0.80000 | XP_057786296.1 |
| 4 | Cytosol | 细胞质基质 | 0.40000 | XP_057786296.1 |
| 5 | Chromosome | 染色体 | 0.00000 | XP_057786296.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr1:63608747 |
TTG |
T |
2bp_deletion | frameshift_variant | 6 | A23,B105,B109,B27,B75,C47 |
Chr1:63608899 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B65 |
Chr1:63609169 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B133,C14 |
Chr1:63609241 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | B122,B132,B24,B83 |
Chr1:63609243 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B127,B54,C75 |
Chr1:63609508 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B35 |
Chr1:63610149 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B61,B87,B94 |
Chr1:63610187 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | B87,B98,C74,D3 |
Chr1:63610350 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C83 |
Chr1:63610396 |
AG |
A |
1bp_deletion | frameshift_variant | 1 | B51 |
Chr1:63610396 |
AG |
A |
1bp_deletion | CDS_variant | 1 | B51 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
3 records
下载 cDNA FASTA3 records
下载 CDS FASTA3 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。