当前解析结果
SmilChr01G004580| 统一新 Gene ID | SmilChr01G004580 |
|---|---|
| 名称 | SmilChr01G004580 |
| 描述 | uncharacterized SmilChr01G004580 |
| 染色体 / SeqID | Chr01 / NC_080387.1 |
| 坐标与链方向 | 63847486 - 63849430 / + |
| NCBI Gene ID | LOC131004758 |
|---|---|
| GeneID | 131004758 |
| locus_tag | - |
| NCBI Name | LOC131004758 |
| 原始查询 | SmilChr01G004580 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | OSJNBa0069E14.10; symbol=OSJNBa0069E14.10; hit=Os03g0748600; species=rice; confidence=medium |
| 产物 | OSJNBa0069E14.10; symbol=OSJNBa0069E14.10; hit=Os03g0748600; species=rice; confidence=medium |
| Arabidopsis | AT5G37480 (AT5G37480)maltase-glucoamylase, intestinal protein [Source:NCBI gene (formerly Entrezgene);Acc:833726] identity=48.8; qcov=0.771; evalue=1.86e-18; confidence=low |
| Rice | Os03g0748600 (OSJNBa0069E14.10)- identity=53.6; qcov=0.771; evalue=4.54e-25; confidence=medium |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131004758 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Endoplasmic reticulum | 内质网 | 1.00000 | XP_057787497.1 |
| 2 | Cytoplasm | 细胞质 | 0.80000 | XP_057787505.1 |
| 3 | Cytosol | 细胞质基质 | 0.80000 | XP_057787505.1 |
| 4 | Nucleus | 细胞核 | 0.60000 | XP_057787505.1 |
| 5 | Endoplasmic reticulum membrane | 内质网膜 | 0.20000 | XP_057787497.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr1:63847688 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B133 |
Chr1:63847706 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B56 |
Chr1:63847734 |
AC |
A |
1bp_deletion | frameshift_variant | 1 | C84 |
Chr1:63847734 |
AC |
A |
1bp_deletion | CDS_variant | 1 | C84 |
Chr1:63847916 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | C12,C30 |
Chr1:63847926 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B85 |
Chr1:63847940 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B50,B52,B68 |
Chr1:63847951 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | D11 |
Chr1:63847956 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | A20,B50,B52 |
Chr1:63847957 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | C12,C30 |
Chr1:63847984 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | D10 |
Chr1:63847996 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | A8,B82 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
3 records
下载 cDNA FASTA3 records
下载 CDS FASTA3 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。