当前解析结果
SmilChr01G004730| 统一新 Gene ID | SmilChr01G004730 |
|---|---|
| 名称 | SmilChr01G004730 |
| 描述 | F-box protein At4g18380-like |
| 染色体 / SeqID | Chr01 / NC_080387.1 |
| 坐标与链方向 | 65468357 - 65469247 / + |
| NCBI Gene ID | LOC131005075 |
|---|---|
| GeneID | 131005075 |
| locus_tag | - |
| NCBI Name | LOC131005075 |
| 原始查询 | SmilChr01G004730 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | F-box protein At4g18380-like |
| 产物 | F-box protein At4g18380-like |
| Arabidopsis | AT5G46170 (AT5G46170)F-box family protein [Source:NCBI gene (formerly Entrezgene);Acc:834659] identity=43.5; qcov=0.449; evalue=1.37e-08; confidence=low |
| Rice | Os01g0770400 (OsFbox040)- identity=38.8; qcov=0.486; evalue=1.09e-08; confidence=low |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131005075 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Cytoplasm | 细胞质 | 0.80000 | XP_057787863.1 |
| 2 | Nucleus | 细胞核 | 0.20000 | XP_057787863.1 |
| 3 | Chromosome | 染色体 | 0.00000 | XP_057787863.1 |
| 4 | Centromere | 着丝粒 | 0.00000 | XP_057787863.1 |
| 5 | Chromatin | 染色质 | 0.00000 | XP_057787863.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr1:65468505 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B21 |
Chr1:65468539 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C53 |
Chr1:65468613 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | B108,B94,C26,C50 |
Chr1:65468746 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | B108,B94,C26,C50 |
Chr1:65468789 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C53 |
Chr1:65468927 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | B107,B23,B33,B83,C29 |
Chr1:65468956 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B87,C36,C59 |
Chr1:65468978 |
TG |
T |
1bp_deletion | frameshift_variant | 9 | A16,B127,B136,B45,B6,B80,C20,C44,C56 |
Chr1:65469031 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | C36,C59 |
Chr1:65469042 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | C36,C59 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。