当前解析结果
SmilChr01G004739| 统一新 Gene ID | SmilChr01G004739 |
|---|---|
| 名称 | SmilChr01G004739 |
| 描述 | uncharacterized SmilChr01G004739 |
| 染色体 / SeqID | Chr01 / NC_080387.1 |
| 坐标与链方向 | 65583524 - 65588628 / + |
| NCBI Gene ID | LOC131005084 |
|---|---|
| GeneID | 131005084 |
| locus_tag | - |
| NCBI Name | LOC131005084 |
| 原始查询 | SmilChr01G004739 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:844400]; symbol=AT1G80610; hit=AT1G80610; species=arabidopsis; confidence=medium |
| 产物 | uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:844400]; symbol=AT1G80610; hit=AT1G80610; species=arabidopsis; confidence=medium |
| Arabidopsis | AT1G80610 (AT1G80610)uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:844400] identity=38.3; qcov=1.03; evalue=1.05e-26; confidence=medium |
| Rice | -- |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131005084 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus | 细胞核 | 1.00000 | XP_057787873.1 |
| 2 | Chromosome | 染色体 | 0.00000 | XP_057787873.1 |
| 3 | Centromere | 着丝粒 | 0.00000 | XP_057787873.1 |
| 4 | Chromatin | 染色质 | 0.00000 | XP_057787873.1 |
| 5 | Telomere | 端粒 | 0.00000 | XP_057787873.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr1:65583746 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | A11 |
Chr1:65583776 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B94 |
Chr1:65583820 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | C15,C25 |
Chr1:65584027 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C47 |
Chr1:65586684 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | B41,B88,C37,C40 |
Chr1:65587879 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | D10 |
Chr1:65587897 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | B108,B94,C26,C50 |
Chr1:65587932 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B66 |
Chr1:65588017 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C47 |
Chr1:65588035 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B87,C36,C59 |
Chr1:65588054 |
A |
AT |
1bp_insertion | frameshift_variant | 1 | C51 |
Chr1:65588054 |
A |
AT |
1bp_insertion | CDS_variant | 1 | C51 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。