Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr01G005144`

染色体: Chr01 坐标: 69234499-69249194 链方向: - 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr01G005144`
名称	SmilChr01G005144
描述	uncharacterized SmilChr01G005144
染色体 / SeqID	Chr01 / NC_080387.1
坐标与链方向	69234499 - 69249194 / `-`

ID 对照

NCBI Gene ID	`LOC131005477`
GeneID	`131005477`
locus_tag	`-`
NCBI Name	`LOC131005477`
原始查询	`SmilChr01G005144`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; Arabidopsis/Rice homolog
描述	uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:816677]; symbol=AT2G21385; hit=AT2G21385; species=arabidopsis; confidence=high
产物	uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:816677]; symbol=AT2G21385; hit=AT2G21385; species=arabidopsis; confidence=high
Arabidopsis	`AT2G21385` (AT2G21385) uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:816677] identity=64.5; qcov=1.01; evalue=4.08e-149; confidence=high
Rice	`Os09g0531100` - identity=70.9; qcov=0.858; evalue=4.37e-146; confidence=high
GO	-
KEGG	-
Pfam	-
InterPro	-
eggNOG	-
NR	GeneID:131005477

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Chloroplast	叶绿体	1.00000	`XP_057788456.1`
2	Chloroplast stroma	叶绿体基质	1.00000	`XP_057788456.1`
3	Nucleus	细胞核	0.00000	`XP_057788456.1`
4	Chromosome	染色体	0.00000	`XP_057788456.1`
5	Centromere	着丝粒	0.00000	`XP_057788456.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr1:69240151`	`G`	`A`	EMS_canonical_SNV	CDS_variant	4	B105,B28,C46,D6
`Chr1:69240372`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B82
`Chr1:69241536`	`G`	`A`	EMS_canonical_SNV	CDS_variant	4	B105,B28,C46,D6
`Chr1:69241927`	`C`	`T`	EMS_canonical_SNV	CDS_variant	3	B136,B61,B64
`Chr1:69241938`	`G`	`A`	EMS_canonical_SNV	CDS_variant	3	B101,B12,C58
`Chr1:69241967`	`C`	`T`	EMS_canonical_SNV	CDS_variant	5	B1,B117,B66,B77,C54
`Chr1:69241979`	`G`	`A`	EMS_canonical_SNV	CDS_variant	3	A5,B5,B70
`Chr1:69241990`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B119
`Chr1:69242179`	`G`	`A`	EMS_canonical_SNV	CDS_variant	5	B1,B117,B66,B77,C54
`Chr1:69242778`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	C26
`Chr1:69244451`	`ACC`	`A`	2bp_deletion	frameshift_variant	3	B1,B7,B94
`Chr1:69244505`	`AT`	`A`	1bp_deletion	frameshift_variant	102	A14,A15,A19,A2,A22,A23,A25,A3,A4,A5,A7,A9,B10,B100,B102,B109,B11,B111,B121,B125,B126,B128,B134,B138,B15,B17,B23,B26,B32,B36,B38,B39,B40,B42,B43,B49,B52,B54,B56,B6,B61,B62,B65,B67,B69,B71,B72,B73,B76,B81,B82,B83,B85,B86,B87,B88,B9,B96,C1,C10,C11,C13,C16,C17,C25,C26,C29,C3,C30,C31,C33,C36,C37,C39,C4,C40,C45,C48,C51,C52,C57,C62,C63,C64,C66,C69,C70,C71,C72,C73,C75,C76,C77,C8,C83,C86,C9,D1,D10,D3,D7,D8

进入 EMS 突变库

预测功能结构域

当前发布数据中，此基因没有可展示的 Pfam 结构域命中。

进入结构域查询

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

11 records

下载 cDNA FASTA

XR_009095269.1
TGTGACGCGACTTCTTCTGAATTTTGCTTTGCCTCTCAGCGACATTGTGCGAACCGATAAGCAAAATCTGAGGCTGCGCCTCTCAAATTGCTTTACATTAGAAAAAAATTTATTTCTGCTAATTTTCAGCTGAATTCAACTGAAAAATGGCAACTGCTACATGTTTCTTCACTTCAACTTCAACGTCTCATGTTTGCTCGTTTTTGCAGTGTAGGAGATGGAATAATAGGATGCTTGGACAAGTAAAATTTACTTCTTTG...

XR_009095275.1
GACTTCTTCTGAATTTTGCTTTGCCTCTCAGCGACATTGTGCGAACCGATAAGCAAAATCTGAGGCTGCGCCTCTCAAATTGCTTTACATTAGAAAAAAATTTATTTCTGCTAATTTTCAGCTGAATTCAACTGAAAAATGGCAACTGCTACATGTTTCTTCACTTCAACTTCAACGTCTCATGTTTGCTCGTTTTTGCAGTGTAGGAGATGGAATAATAGGATGCTTGGACAAGTAAAATTTACTTCTTTGAATTTCGT...

CDS

2 records

下载 CDS FASTA

LOC131005477
ATGGCAACTGCTACATGTTTCTTCACTTCAACTTCAACGTCTCATGTTTGCTCGTTTTTGCAGTGTAGGAGATGGAATAATAGGATGCTTGGACAAGTAAAATTTACTTCTTTGAATTTCGTAGGATGGAAGCAGAGGAGAAATTTGATCTGTGCAGTCGATAAGGATGCCGAAAAATCATTTAAAAAGACTGTGGAGATAGACCGACTGATAGACATACTACGGGATGCAGATGATAAGGAAGTTCAGCAACTTGTTGT...

Protein

2 records

下载 Protein FASTA

XP_057788456.1
MATATCFFTSTSTSHVCSFLQCRRWNNRMLGQVKFTSLNFVGWKQRRNLICAVDKDAEKSFKKTVEIDRLIDILRDADDKEVQQLVVENVLAFNEGFWIRLAARTETCKSEDDKKDYEELAAVLMNVVDRLVHKTKEKIESATDVLKAILKPVVDEEEEIPWPPRDPEALVLMQKELNQREQEGQLDEGFLAEVNAQLRQLMCRRRKTATSRGLRLCCKRFCNCMLPESSLSVVTQKKQFIDALLLFWVGNEVLKTEQFL...

XP_057788458.1
MATATCFFTSTSTSHVCSFLQCRRWNNRMLGQVKFTSLNFVGWKQRRNLICAVDKDAEKSFKKTVEIDRLIDILRDADDKEVQQLVVENVLAFNEGFWIRLAARTETCKSEDDKKDYEELAAVLMNVVDRLVHKTKEKIESATDVLKAILKPVVDEEEEIPWPPRDPEALVLMQKELNQREQEGQLDEGFLAEVNAQLRQAKEDGDKPGLEAMLQKVLQLYASRVLSKRSYAKKGNEVLKTEQFLETLIQAPETEWNKLL...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

下载 upstream 下载 downstream 下载 upstream + gene + downstream

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