Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr01G005177`

染色体: Chr01 坐标: 69506974-69508217 链方向: + 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr01G005177`
名称	SmilChr01G005177
描述	glucosamine 6-phosphate N-acetyltransferase-like
染色体 / SeqID	Chr01 / NC_080387.1
坐标与链方向	69506974 - 69508217 / `+`

ID 对照

NCBI Gene ID	`LOC131005512`
GeneID	`131005512`
locus_tag	`-`
NCBI Name	`LOC131005512`
原始查询	`SmilChr01G005177`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; NCBI GO GAF; KEGG smil; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	glucosamine 6-phosphate N-acetyltransferase-like
产物	glucosamine 6-phosphate N-acetyltransferase-like
Arabidopsis	`AT5G15770` (GNA1) glucose-6-phosphate acetyltransferase 1 [Source:NCBI gene (formerly Entrezgene);Acc:831433] identity=69.4; qcov=0.9; evalue=9.93e-73; confidence=high
Rice	`Os09g0488000` (OsGNA1) - identity=50; qcov=0.9; evalue=3.02e-53; confidence=high
GO	GO:0004343 (glucosamine 6-phosphate N-acetyltransferase activity); GO:0005783 (endoplasmic reticulum); GO:0005793 (endoplasmic reticulum-Golgi intermediate compartment); GO:0005794 (Golgi apparatus); GO:0006048 (UDP-N-acetylglucosamine biosynthetic process); GO:0048029 (monosaccharide binding)
KEGG	smil00520 (Amino sugar and nucleotide sugar metabolism - Salvia miltiorrhiza (redroot sage)); smil01100 (Metabolic pathways - Salvia miltiorrhiza (redroot sage)); smil01250 (Biosynthesis of nucleotide sugars - Salvia miltiorrhiza (redroot sage))
Pfam	PF00583 (Acetyltransf_1); PF13508 (Acetyltransf_7); PF13673 (Acetyltransf_10)
InterPro	-
eggNOG	-
NR	GeneID:131005512

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Cytosol	细胞质基质	1.00000	`XP_057788504.1`
2	Cytoplasm	细胞质	0.80000	`XP_057788504.1`
3	Nucleus	细胞核	0.60000	`XP_057788505.1`
4	Chromosome	染色体	0.00000	`XP_057788504.1`
5	Centromere	着丝粒	0.00000	`XP_057788504.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr1:69507582`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B44
`Chr1:69507627`	`TC`	`T`	1bp_deletion	frameshift_variant	50	A10,A9,B11,B113,B117,B118,B120,B121,B125,B129,B130,B131,B134,B135,B15,B25,B30,B37,B45,B49,B56,B6,B64,B67,B68,B74,B75,B9,B90,B92,B96,C15,C21,C24,C26,C28,C36,C41,C42,C44,C54,C59,C63,C65,C7,C70,C71,C78,C85,D4
`Chr1:69507662`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B64
`Chr1:69507673`	`G`	`A`	EMS_canonical_SNV	CDS_variant	2	B44,B94
`Chr1:69507784`	`C`	`T`	EMS_canonical_SNV	stop_gained	4	A21,A24,B19,B56
`Chr1:69507784`	`C`	`T`	EMS_canonical_SNV	CDS_variant	4	A21,A24,B19,B56
`Chr1:69507801`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	D11
`Chr1:69507802`	`GC`	`G`	1bp_deletion	frameshift_variant	2	B63,B83
`Chr1:69507802`	`GC`	`G`	1bp_deletion	CDS_variant	2	B63,B83
`Chr1:69507811`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B94
`Chr1:69507843`	`CAG`	`C`	2bp_deletion	frameshift_variant	1	D10
`Chr1:69507843`	`CAG`	`C`	2bp_deletion	CDS_variant	1	D10

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057788504.1

198 aa

198

Acetyltransf_10

Acetyltransf_1

Acetyltransf_7

PF13673 Acetyltransf_10 81-189 aa PF00583 Acetyltransf_1 82-185 aa PF13508 Acetyltransf_7 98-186 aa

XP_057788505.1

160 aa

160

Acetyltransf_10

Acetyltransf_1

Acetyltransf_7

PF13673 Acetyltransf_10 43-151 aa PF00583 Acetyltransf_1 44-147 aa PF13508 Acetyltransf_7 60-148 aa

Protein ID	来源	结构域编号	结构域名称	类型	起始 aa	终止 aa	E-value	Score	说明
`XP_057788504.1`	Pfam	`PF13673`	Acetyltransf_10	Domain	81	189	2.5e-07	31.4	Acetyltransferase (GNAT) domain
`XP_057788504.1`	Pfam	`PF00583`	Acetyltransf_1	Family	82	185	4.4e-18	66.4	Acetyltransferase (GNAT) family
`XP_057788504.1`	Pfam	`PF13508`	Acetyltransf_7	Domain	98	186	1.7e-11	45.1	Acetyltransferase (GNAT) domain
`XP_057788505.1`	Pfam	`PF13673`	Acetyltransf_10	Domain	43	151	1.7e-07	32.0	Acetyltransferase (GNAT) domain
`XP_057788505.1`	Pfam	`PF00583`	Acetyltransf_1	Family	44	147	2.6e-18	67.1	Acetyltransferase (GNAT) family
`XP_057788505.1`	Pfam	`PF13508`	Acetyltransf_7	Domain	60	148	1e-11	45.8	Acetyltransferase (GNAT) domain

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

2 records

下载 cDNA FASTA

XM_057932522.1
GGCCCATCGGTCTTCCAGTCTCCAAAGAATTGGGTCGAATTAACATGAACAAGTTAACGTAAATATCTGCGCCGGCAGCAGCAGCCGTTTCCAACGCCCAAGTTCCCAACAAAAGAAATCTGGCTTCAATCTGAAGATCTTTCTCTATAAAGCGATGGAAACAACGAAGTCTTCCACGGAAGAGGAGGCATTTGAATTCGAAGTGAGGAAGCTCGAGATCTCGGACAAGAGGAAGGGTTTCGTGGAGCTTCTTCAGCAGC...

XM_057932521.1
TCGGTCTTCCAGTCTCCAAAGAATTGGGTCGAATTAACATGAACAAGTTAACGTAAATATCTGCGCCGGCAGCAGCAGCCGTTTCCAACGCCCAAGTTCCCAACAAAAGGTAAGGCGGCAGGCTATTTTGGTGTTCTGCAAGTTTGAATTTTGATTTTGTTTTTCCGTCTTACCGAATAATCCACCGATTAACTCGAACATTTTTTAGATCTACAAAAATACTTGAATATTTTGTAGATCTGTGAAAATAATCGGACATT...

CDS

2 records

下载 CDS FASTA

LOC131005512
ATGCTAGGCTTTCACGATCACGATGCTGATTTCGATAATCTAACCTCATGTCTGTCGATCCTTTTCAATCTTCAGAAATCTGGCTTCAATCTGAAGATCTTTCTCTATAAAGCGATGGAAACAACGAAGTCTTCCACGGAAGAGGAGGCATTTGAATTCGAAGTGAGGAAGCTCGAGATCTCGGACAAGAGGAAGGGTTTCGTGGAGCTTCTTCAGCAGCTGACCGTGTGCGACTCCATCTCCGACGAAGCATTCGACCG...

LOC131005512
ATGGAAACAACGAAGTCTTCCACGGAAGAGGAGGCATTTGAATTCGAAGTGAGGAAGCTCGAGATCTCGGACAAGAGGAAGGGTTTCGTGGAGCTTCTTCAGCAGCTGACCGTGTGCGACTCCATCTCCGACGAAGCATTCGACCGACGGTTCGAGGAGGTGGCCGAGTACGGCGACGACCATCTCATATGCGTCGTCGAAGACAGAGATTCGGGGAGGATCATTGCAACCGGTAGCGTGTTGATAGAGAAGAAATTCAT...

Protein

2 records

下载 Protein FASTA

XP_057788504.1
MLGFHDHDADFDNLTSCLSILFNLQKSGFNLKIFLYKAMETTKSSTEEEAFEFEVRKLEISDKRKGFVELLQQLTVCDSISDEAFDRRFEEVAEYGDDHLICVVEDRDSGRIIATGSVLIEKKFIRNCGKVGHIEDVVVDSNIRGKHLGRKMIGFLCDHARAMGCYKVILDCSSDNVAFYERCGFKRKEIQMVNYFGS

XP_057788505.1
METTKSSTEEEAFEFEVRKLEISDKRKGFVELLQQLTVCDSISDEAFDRRFEEVAEYGDDHLICVVEDRDSGRIIATGSVLIEKKFIRNCGKVGHIEDVVVDSNIRGKHLGRKMIGFLCDHARAMGCYKVILDCSSDNVAFYERCGFKRKEIQMVNYFGS

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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