当前解析结果
SmilChr01G005194| 统一新 Gene ID | SmilChr01G005194 |
|---|---|
| 名称 | SmilChr01G005194 |
| 描述 | uncharacterized SmilChr01G005194 |
| 染色体 / SeqID | Chr01 / NC_080387.1 |
| 坐标与链方向 | 69627145 - 69631952 / - |
| NCBI Gene ID | LOC131005526 |
|---|---|
| GeneID | 131005526 |
| locus_tag | - |
| NCBI Name | LOC131005526 |
| 原始查询 | SmilChr01G005194 |
| 来源 | GFF basic annotation; NCBI GO GAF; Arabidopsis/Rice homolog |
|---|---|
| 描述 | Calcium-binding EF-hand family protein [Source:NCBI gene (formerly Entrezgene);Acc:830036]; symbol=AT4G38810; hit=AT4G38810; species=arabidopsis; confidence=high |
| 产物 | Calcium-binding EF-hand family protein [Source:NCBI gene (formerly Entrezgene);Acc:830036]; symbol=AT4G38810; hit=AT4G38810; species=arabidopsis; confidence=high |
| Arabidopsis | AT4G38810 (AT4G38810)Calcium-binding EF-hand family protein [Source:NCBI gene (formerly Entrezgene);Acc:830036] identity=65.2; qcov=0.992; evalue=8.88e-167; confidence=high |
| Rice | Os10g0177200 (OsDSR-1)- identity=58.1; qcov=0.964; evalue=7.09e-145; confidence=high |
| GO | GO:0005509 (calcium ion binding) |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131005526 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Cytoplasm | 细胞质 | 1.00000 | XP_057788524.1 |
| 2 | Cytosol | 细胞质基质 | 0.60000 | XP_057788524.1 |
| 3 | Nucleus | 细胞核 | 0.00000 | XP_057788524.1 |
| 4 | Chromosome | 染色体 | 0.00000 | XP_057788524.1 |
| 5 | Centromere | 着丝粒 | 0.00000 | XP_057788524.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr1:69627405 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B110,C82 |
Chr1:69627447 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | B108,B130,B4,C23,C84 |
Chr1:69627450 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | B108,B130,B4,C23,C84 |
Chr1:69627462 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C17 |
Chr1:69627474 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C82 |
Chr1:69627483 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | B101,B63,C15,C21 |
Chr1:69627507 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B10,B32 |
Chr1:69627531 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | D10 |
Chr1:69627589 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B23,B72 |
Chr1:69627592 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | D11 |
Chr1:69628857 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | A4,B82,C49 |
Chr1:69629130 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C17 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。