当前解析结果
SmilChr01G005234| 统一新 Gene ID | SmilChr01G005234 |
|---|---|
| 名称 | SmilChr01G005234 |
| 描述 | uncharacterized SmilChr01G005234 |
| 染色体 / SeqID | Chr01 / NC_080387.1 |
| 坐标与链方向 | 69923766 - 69926526 / + |
| NCBI Gene ID | LOC131005562 |
|---|---|
| GeneID | 131005562 |
| locus_tag | - |
| NCBI Name | LOC131005562 |
| 原始查询 | SmilChr01G005234 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | confidence=no_hit |
| 产物 | confidence=no_hit |
| Arabidopsis | -- |
| Rice | -- |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131005562 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus | 细胞核 | 1.00000 | XP_057788553.1 |
| 2 | Chromosome | 染色体 | 0.80000 | XP_057788553.1 |
| 3 | Cytoplasm | 细胞质 | 0.20000 | XP_057788553.1 |
| 4 | Centromere | 着丝粒 | 0.00000 | XP_057788553.1 |
| 5 | Chromatin | 染色质 | 0.00000 | XP_057788553.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr1:69924849 |
G |
GCT |
2bp_insertion | frameshift_variant | 174 | A1,A10,A11,A14,A16,A18,A19,A2,A20,A21,A23,A24,A25,A3,A4,A7,A9,B1,B10,B100,B102,B103,B105,B106,B108,B109,B11,B110,B111,B114,B117,B119,B120,B123,B125,B126,B127,B128,B130,B131,B132,B134,B136,B137,B139,B14,B15,B17,B18,B20,B22,B27,B3,B30,B31,B32,B34,B35,B36,B4,B41,B42,B45,B49,B51,B54,B57,B58,B6,B60,B62,B63,B67,B68,B69,B7,B70,B71,B75,B76,B78,B79,B80,B81,B83,B86,B87,B89,B90,B91,B93,B94,B96,B97,B98,C1,C10,C11,C12,C13,C14,C15,C16,C17,C18,C19,C20,C21,C22,C23,C25,C26,C27,C28,C30,C31,C33,C34,C36,C37,C38,C39,C4,C40,C41,C42,C43,C45,C46,C48,C49,C5,C50,C52,C53,C54,C55,C56,C58,C59,C6,C60,C61,C62,C63,C64,C65,C67,C68,C69,C7,C70,C72,C73,C75,C76,C79,C8,C80,C82,C83,C84,C85,C86,C87,D1,D10,D11,D2,D3,D5,D7,D8,D9 |
Chr1:69925597 |
CA |
C |
1bp_deletion | frameshift_variant | 161 | A1,A10,A11,A14,A16,A19,A2,A20,A23,A25,A3,A4,A7,A9,B10,B100,B102,B103,B105,B108,B109,B110,B111,B113,B114,B117,B119,B121,B123,B125,B126,B127,B128,B130,B131,B132,B134,B136,B137,B139,B14,B140,B15,B16,B17,B20,B22,B3,B30,B31,B32,B34,B35,B36,B42,B45,B47,B49,B50,B51,B54,B57,B58,B6,B60,B62,B67,B68,B70,B71,B73,B75,B76,B78,B79,B81,B83,B86,B87,B89,B90,B94,B96,B97,B98,C1,C10,C11,C12,C13,C15,C16,C17,C18,C19,C20,C21,C22,C23,C24,C25,C27,C28,C29,C30,C31,C32,C33,C34,C36,C37,C38,C39,C4,C40,C41,C42,C43,C46,C48,C49,C5,C50,C52,C53,C54,C55,C56,C58,C59,C6,C61,C62,C64,C65,C67,C68,C69,C7,C70,C72,C73,C75,C76,C79,C8,C80,C82,C83,C84,C85,C86,C87,D1,D11,D2,D3,D5,D7,D8,D9 |
Chr1:69925603 |
A |
AG |
1bp_insertion | stop_gained,frameshift_variant | 161 | A1,A10,A11,A14,A16,A19,A2,A20,A23,A25,A3,A4,A7,A9,B10,B100,B102,B103,B105,B108,B109,B110,B111,B113,B114,B117,B119,B121,B123,B125,B126,B127,B128,B130,B131,B132,B134,B136,B137,B139,B14,B140,B15,B16,B17,B20,B22,B3,B30,B31,B32,B34,B35,B36,B42,B45,B47,B49,B50,B51,B54,B57,B58,B6,B60,B62,B67,B68,B70,B71,B73,B75,B76,B78,B79,B81,B83,B86,B87,B89,B90,B94,B96,B97,B98,C1,C10,C11,C12,C13,C15,C16,C17,C18,C19,C20,C21,C22,C23,C24,C25,C27,C28,C29,C30,C31,C32,C33,C34,C36,C37,C38,C39,C4,C40,C41,C42,C43,C46,C48,C49,C5,C50,C52,C53,C54,C55,C56,C58,C59,C6,C61,C62,C64,C65,C67,C68,C69,C7,C70,C72,C73,C75,C76,C79,C8,C80,C82,C83,C84,C85,C86,C87,D1,D11,D2,D3,D5,D7,D8,D9 |
Chr1:69925662 |
ACT |
A |
2bp_deletion | frameshift_variant | 172 | A1,A10,A11,A14,A16,A18,A19,A2,A20,A21,A23,A25,A3,A4,A7,A9,B1,B10,B100,B102,B103,B105,B108,B109,B11,B110,B111,B114,B117,B119,B120,B121,B123,B125,B126,B127,B128,B130,B131,B132,B134,B136,B137,B14,B140,B15,B16,B17,B18,B20,B22,B3,B30,B31,B32,B34,B35,B36,B4,B41,B42,B45,B47,B49,B50,B51,B54,B57,B58,B6,B60,B62,B63,B67,B68,B69,B7,B70,B73,B75,B76,B78,B79,B81,B83,B86,B87,B89,B90,B91,B93,B94,B96,B97,B98,C1,C10,C11,C12,C13,C14,C15,C16,C18,C19,C20,C21,C22,C23,C24,C25,C26,C27,C28,C29,C30,C31,C33,C34,C36,C37,C38,C39,C4,C41,C42,C43,C46,C48,C49,C5,C50,C52,C53,C54,C55,C56,C58,C59,C6,C60,C61,C62,C63,C64,C65,C68,C69,C7,C70,C72,C73,C75,C76,C79,C8,C80,C82,C83,C84,C85,C86,C87,D1,D10,D11,D2,D3,D5,D7,D8,D9 |
Chr1:69925665 |
AT |
A |
1bp_deletion | frameshift_variant | 172 | A1,A10,A11,A14,A16,A18,A19,A2,A20,A21,A23,A25,A3,A4,A7,A9,B1,B10,B100,B102,B103,B105,B108,B109,B11,B110,B111,B114,B117,B119,B120,B121,B123,B125,B126,B127,B128,B130,B131,B132,B134,B136,B137,B14,B140,B15,B16,B17,B18,B20,B22,B3,B30,B31,B32,B34,B35,B36,B4,B41,B42,B45,B47,B49,B50,B51,B54,B57,B58,B6,B60,B62,B63,B67,B68,B69,B7,B70,B73,B75,B76,B78,B79,B81,B83,B86,B87,B89,B90,B91,B93,B94,B96,B97,B98,C1,C10,C11,C12,C13,C14,C15,C16,C18,C19,C20,C21,C22,C23,C24,C25,C26,C27,C28,C29,C30,C31,C33,C34,C36,C37,C38,C39,C4,C41,C42,C43,C46,C48,C49,C5,C50,C52,C53,C54,C55,C56,C58,C59,C6,C60,C61,C62,C63,C64,C65,C68,C69,C7,C70,C72,C73,C75,C76,C79,C8,C80,C82,C83,C84,C85,C86,C87,D1,D10,D11,D2,D3,D5,D7,D8,D9 |
Chr1:69925902 |
TG |
T |
1bp_deletion | frameshift_variant | 157 | A13,A15,A16,A19,A22,A24,A25,A3,A4,A5,A6,A7,A8,A9,B1,B10,B101,B103,B104,B105,B106,B107,B108,B109,B110,B111,B112,B115,B117,B118,B12,B121,B124,B129,B13,B130,B133,B135,B136,B137,B138,B139,B140,B15,B16,B17,B19,B2,B20,B21,B22,B23,B24,B25,B26,B27,B28,B29,B3,B30,B32,B33,B35,B36,B37,B38,B39,B4,B40,B41,B43,B44,B46,B47,B48,B5,B50,B52,B53,B55,B56,B58,B59,B6,B60,B61,B62,B64,B65,B66,B68,B71,B72,B73,B74,B76,B77,B78,B79,B8,B82,B84,B85,B88,B9,B92,B94,B95,B97,B99,C1,C10,C17,C2,C20,C21,C24,C25,C29,C3,C32,C35,C37,C40,C41,C44,C46,C47,C51,C54,C57,C6,C62,C64,C66,C67,C68,C69,C7,C70,C71,C72,C74,C77,C78,C79,C81,C83,C84,C86,C87,C9,D1,D11,D3,D4,D6 |
Chr1:69925931 |
GC |
G |
1bp_deletion | frameshift_variant | 1 | B9 |
Chr1:69925931 |
GC |
G |
1bp_deletion | CDS_variant | 1 | B9 |
Chr1:69925961 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B9 |
Chr1:69925987 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B104,B24 |
Chr1:69926016 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B104,B24 |
Chr1:69926025 |
G |
GA |
1bp_insertion | frameshift_variant | 169 | A1,A10,A11,A14,A18,A19,A2,A20,A21,A23,A24,A25,A3,A4,A7,A9,B1,B10,B100,B102,B103,B105,B109,B11,B110,B111,B113,B114,B119,B120,B121,B123,B125,B126,B127,B128,B130,B131,B132,B134,B136,B137,B139,B14,B140,B15,B16,B17,B18,B20,B22,B3,B30,B31,B34,B35,B36,B4,B42,B45,B49,B50,B51,B54,B57,B58,B6,B60,B62,B63,B67,B68,B69,B7,B70,B73,B75,B78,B79,B80,B81,B83,B86,B87,B89,B90,B91,B93,B94,B96,B97,B98,C1,C10,C11,C12,C13,C14,C15,C16,C18,C19,C20,C21,C22,C23,C25,C26,C27,C28,C30,C31,C32,C33,C34,C36,C37,C38,C39,C4,C40,C41,C42,C43,C45,C46,C48,C49,C5,C50,C52,C53,C54,C55,C56,C58,C59,C6,C60,C61,C63,C64,C65,C67,C69,C7,C70,C72,C73,C75,C76,C79,C8,C80,C82,C83,C84,C85,C86,C87,D1,D10,D11,D2,D3,D5,D7,D8,D9 |
每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
3 records
下载 cDNA FASTA3 records
下载 CDS FASTA3 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。