Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr01G005367`

染色体: Chr01 坐标: 70885818-70889717 链方向: - 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr01G005367`
名称	SmilChr01G005367
描述	N-(5'-phosphoribosyl)anthranilate isomerase 1, chloroplastic-like
染色体 / SeqID	Chr01 / NC_080387.1
坐标与链方向	70885818 - 70889717 / `-`

ID 对照

NCBI Gene ID	`LOC131005696`
GeneID	`131005696`
locus_tag	`-`
NCBI Name	`LOC131005696`
原始查询	`SmilChr01G005367`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; NCBI GO GAF; KEGG smil; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	N-(5'-phosphoribosyl)anthranilate isomerase 1, chloroplastic-like
产物	N-(5'-phosphoribosyl)anthranilate isomerase 1%2C chloroplastic-like
Arabidopsis	`AT1G07780` (PAI1) phosphoribosylanthranilate isomerase 1 [Source:NCBI gene (formerly Entrezgene);Acc:837292] identity=62.9; qcov=0.988; evalue=7.21e-117; confidence=high
Rice	`Os02g0266000` - identity=64.3; qcov=0.82; evalue=2.77e-97; confidence=high
GO	GO:0000162 (L-tryptophan biosynthetic process); GO:0004640 (phosphoribosylanthranilate isomerase activity)
KEGG	smil00400 (Phenylalanine, tyrosine and tryptophan biosynthesis - Salvia miltiorrhiza (redroot sage)); smil01100 (Metabolic pathways - Salvia miltiorrhiza (redroot sage)); smil01110 (Biosynthesis of secondary metabolites - Salvia miltiorrhiza (redroot sage)); smil01230 (Biosynthesis of amino acids - Salvia miltiorrhiza (redroot sage))
Pfam	PF00697 (PRAI)
InterPro	-
eggNOG	-
NR	GeneID:131005696

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Chloroplast	叶绿体	1.00000	`XP_057788712.1`
2	Chloroplast stroma	叶绿体基质	0.60000	`XP_057788714.1`
3	Mitochondrion	线粒体	0.40000	`XP_057788715.1`
4	Cytoplasm	细胞质	0.20000	`XP_057788715.1`
5	Nucleus	细胞核	0.00000	`XP_057788713.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr1:70887013`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	C15,C21
`Chr1:70887165`	`G`	`A`	EMS_canonical_SNV	CDS_variant	3	A18,B46,C37
`Chr1:70887270`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	D7
`Chr1:70887432`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	C5
`Chr1:70887510`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	B103,C60
`Chr1:70887540`	`C`	`T`	EMS_canonical_SNV	stop_gained	1	D7
`Chr1:70887540`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	D7
`Chr1:70889100`	`C`	`T`	EMS_canonical_SNV	CDS_variant	4	B13,B24,B82,C56

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057788712.1

301 aa

150

301

PRAI

PF00697 PRAI 94-294 aa

XP_057788713.1

303 aa

152

303

PRAI

PF00697 PRAI 96-296 aa

XP_057788714.1

273 aa

136

273

PRAI

PF00697 PRAI 66-266 aa

XP_057788715.1

256 aa

128

256

PRAI

PF00697 PRAI 49-249 aa

Protein ID	来源	结构域编号	结构域名称	类型	起始 aa	终止 aa	E-value	Score	说明
`XP_057788712.1`	Pfam	`PF00697`	PRAI	Domain	94	294	3.4e-37	128.8	N-(5'phosphoribosyl)anthranilate (PRA) isomerase
`XP_057788713.1`	Pfam	`PF00697`	PRAI	Domain	96	296	3.4e-37	128.8	N-(5'phosphoribosyl)anthranilate (PRA) isomerase
`XP_057788714.1`	Pfam	`PF00697`	PRAI	Domain	66	266	2.4e-37	129.3	N-(5'phosphoribosyl)anthranilate (PRA) isomerase
`XP_057788715.1`	Pfam	`PF00697`	PRAI	Domain	49	249	2e-37	129.6	N-(5'phosphoribosyl)anthranilate (PRA) isomerase

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

4 records

下载 cDNA FASTA

XM_057932731.1
GGCTACTTTTAATAATTTGATTACGTAAAAAGAATATAAAAAATTGAAAGTGAAGTAATAACTAATAAGATCTCAGATATTTACATTTGACCCAAAAATATTGATGTACAATGCATTAATTTTTCTTCTTTCCTTGTTTTTTTTGGGAGAGGAAAATTAAGCACAATTCACCGAGCCGAAAACGACGGCAAAAGTTGCAGTTTATCCCGGTTTCCGGTTTTTAGCGGTTTTCGTCGGGTTCAACCTGTTTCTATTTGACA...

XM_057932732.1
GCATTAATTTTTCTTCTTTCCTTGTTTTTTTTGGGAGAGGAAAATTAAGCACAATTCACCGAGCCGAAAACGACGGCAAAAGTTGCAGTTTATCCCGGTTTCCGGTTTTTAGCGGTTTTCGTCGGGTTCAACCTGTTTCTATTTGACACTCGATCGGCGTTTTTGCTGGTTCAACCGGTCGGACCGACCCCAATTTGAACACGTGCTCCAAGCAGCAGCTGCTGCTGTTTCTTCTTCAAATTTTAGATATTTTCTCTTTA...

CDS

4 records

下载 CDS FASTA

LOC131005696
ATGCTCTCAGGTGGCAATGTGGGAGTACAGCTTTTGCCTGAAGTGTCTACTATGCATAAACGTCCAGGTCTCTCATGGACGGAAATCCGTTTTTCCAATATCCCAGTCCTCCAAAAGATGAAAGTAACATGTACGCTGCATCACTCAGAAAGTGTTTCTGCTGCTCAACAGGAACACAATAAGATTAGACCTTCAGTTAAAATGTGTGGAATCACATCAGCTAGAGATGCTGCTATGGCAGCAGAAGCTGGTGCAAATCT...

LOC131005696
ATGCTCTCAGCTTTGAGGTATTCTGCAAATTTGATGTTCTCTCTTTCTAAGGTGGCAATGTGGGAGTACAGCTTTTGCCTGAAGTGTCTACTATGCATAAACGTCCAGTGGAACATAAAATTGACCCACCAAGCACGCCGCCAATCTGCAGGTCTCTCATGGACGGAAATCCGTTTTTCCAATATCCCAGTCCTCCAAAAGATGAAAGTAACATGTACGCTGCATCACTCAGAAAGTGTTTCTGCTGCTCAACAGGAACA...

Protein

4 records

下载 Protein FASTA

XP_057788712.1
MLSALRYSANLMFSLSKVAMWEYSFCLKCLLCINVQWNIKLTHQARRQSAGLSWTEIRFSNIPVLQKMKVTCTLHHSESVSAAQQEHNKIRPSVKMCGITSARDAAMAAEAGANLIGMIIWPNSKRSVSLSVAKEISRVAREHGAEPVGVFVDDDAETILRASEKAELGYVQLHGNGSRDAFQTVVKQNKVIYVLHAKEDGELLNSISDEECSQVDWILVDSAKGGSGKGFDWSRFRFPSIRSRQGWLLAGGIKPDNVFE...

XP_057788713.1
MYCSVALRYSANLMFSLSKVAMWEYSFCLKCLLCINVQWNIKLTHQARRQSAGLSWTEIRFSNIPVLQKMKVTCTLHHSESVSAAQQEHNKIRPSVKMCGITSARDAAMAAEAGANLIGMIIWPNSKRSVSLSVAKEISRVAREHGAEPVGVFVDDDAETILRASEKAELGYVQLHGNGSRDAFQTVVKQNKVIYVLHAKEDGELLNSISDEECSQVDWILVDSAKGGSGKGFDWSRFRFPSIRSRQGWLLAGGIKPDNV...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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