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中文 EN

Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。
示例

当前解析结果

SmilChr01G005387

染色体: Chr01 坐标: 71165277-71171837 链方向: + 类型: protein_coding

基本信息

统一新 Gene IDSmilChr01G005387
名称SmilChr01G005387
描述pentatricopeptide repeat-containing protein At1g62930, chloroplastic-like
染色体 / SeqIDChr01 / NC_080387.1
坐标与链方向71165277 - 71171837 / +

ID 对照

NCBI Gene IDLOC131005716
GeneID131005716
locus_tag-
NCBI NameLOC131005716
原始查询SmilChr01G005387

查看完整 ID 对照表

功能注释

来源GFF basic annotation; NCBI GO GAF; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述pentatricopeptide repeat-containing protein At1g62930, chloroplastic-like
产物pentatricopeptide repeat-containing protein At1g62930%2C chloroplastic-like
ArabidopsisAT3G07030 (AT3G07030)
Alba DNA/RNA-binding protein [Source:NCBI gene (formerly Entrezgene);Acc:3768790]
identity=62.8; qcov=0.507; evalue=1.13e-59; confidence=medium
RiceOs03g0166000
-
identity=74.2; qcov=0.448; evalue=2.79e-58; confidence=low
GOGO:0003723 (RNA binding); GO:0005515 (protein binding)
KEGG-
PfamPF01535 (PPR); PF01918 (Alba); PF12328 (Rpp20); PF12854 (PPR_1); PF13041 (PPR_2); PF13812 (PPR_3); PF23276 (TPR_24)
InterPro-
eggNOG-
NRGeneID:131005716

打开注释模块

亚细胞定位 Top 5

Rank定位位置中文ScoreProtein ID
1 Mitochondrion 线粒体 1.00000 XP_057788739.1
2 Cytoplasm 细胞质 1.00000 XP_057788744.1
3 Nucleus 细胞核 0.60000 XP_057788744.1
4 Cytosol 细胞质基质 0.40000 XP_057788744.1
5 Cytoplasmic granule 细胞质颗粒 0.20000 XP_057788744.1

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置 REF ALT 类型 影响 携带材料数 材料
Chr1:71166551 G A EMS_canonical_SNV CDS_variant 1 B78
Chr1:71166615 C T EMS_canonical_SNV stop_gained 102 A10,A13,A14,A23,A25,A3,A5,A9,B10,B102,B108,B109,B11,B112,B115,B118,B119,B12,B122,B125,B134,B135,B137,B14,B15,B16,B17,B2,B20,B21,B23,B25,B29,B3,B30,B31,B34,B36,B38,B39,B40,B42,B43,B45,B48,B50,B53,B54,B55,B56,B58,B59,B60,B61,B63,B70,B71,B73,B78,B79,B80,B85,B87,B89,B90,B91,B92,B94,B97,B99,C1,C14,C18,C2,C29,C30,C31,C33,C39,C42,C43,C45,C51,C56,C58,C62,C63,C65,C69,C70,C71,C72,C73,C79,C80,C82,C87,C9,D2,D5,D8,D9
Chr1:71166672 G A EMS_canonical_SNV CDS_variant 2 B5,C18
Chr1:71166971 C T EMS_canonical_SNV CDS_variant 1 C8
Chr1:71167090 C T EMS_canonical_SNV CDS_variant 1 B1
Chr1:71167157 C T EMS_canonical_SNV CDS_variant 3 B72,C84,D1
Chr1:71167272 G A EMS_canonical_SNV CDS_variant 3 B87,C14,C2
Chr1:71167283 C T EMS_canonical_SNV CDS_variant 4 B108,B66,C22,C60
Chr1:71167817 G A EMS_canonical_SNV CDS_variant 3 B139,C71,D9
Chr1:71167846 G A EMS_canonical_SNV CDS_variant 5 B22,B49,B76,B81,C3
Chr1:71168079 C T EMS_canonical_SNV CDS_variant 1 A21
Chr1:71168081 G A EMS_canonical_SNV CDS_variant 3 B111,B3,C76

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057788739.1
592 aa
N
1
296
592
PPR_3
PPR
PPR
PPR_2
PPR
PPR_3
PPR_1
PPR_2
PPR
PPR_1
PPR_2
PPR
PPR_3
PPR_1
PPR_2
PPR
PPR_3
PPR_1
PPR_2
PPR
PPR_3
PPR_1
PPR
TPR_24
PPR_2
PPR
PPR_3
PPR_1
PPR
PPR_2
PPR_1
PPR
PPR_3
PPR_2
PPR
PPR_3
PPR_2
PPR
C
PF13812 PPR_3 53-110 aa PF01535 PPR 69-97 aa PF01535 PPR 139-164 aa PF13041 PPR_2 171-220 aa PF01535 PPR 178-201 aa PF13812 PPR_3 195-251 aa PF12854 PPR_1 204-234 aa PF13041 PPR_2 209-255 aa PF01535 PPR 210-239 aa PF12854 PPR_1 237-261 aa PF13041 PPR_2 242-291 aa PF01535 PPR 244-266 aa PF13812 PPR_3 269-322 aa PF12854 PPR_1 275-306 aa PF13041 PPR_2 278-325 aa PF01535 PPR 280-309 aa PF13812 PPR_3 301-344 aa PF12854 PPR_1 312-338 aa PF13041 PPR_2 312-353 aa PF01535 PPR 315-345 aa PF13812 PPR_3 340-393 aa PF12854 PPR_1 344-374 aa PF01535 PPR 351-379 aa PF23276 TPR_24 375-474 aa PF13041 PPR_2 384-431 aa PF01535 PPR 385-413 aa PF13812 PPR_3 405-462 aa PF12854 PPR_1 415-446 aa PF01535 PPR 421-450 aa PF13041 PPR_2 421-466 aa PF12854 PPR_1 448-478 aa PF01535 PPR 455-485 aa PF13812 PPR_3 480-531 aa PF13041 PPR_2 488-530 aa PF01535 PPR 491-520 aa PF13812 PPR_3 510-565 aa PF13041 PPR_2 522-569 aa PF01535 PPR 525-555 aa
XP_057788741.1
592 aa
N
1
296
592
PPR_3
PPR
PPR
PPR_2
PPR
PPR_3
PPR_1
PPR_2
PPR
PPR_1
PPR_2
PPR
PPR_3
PPR_1
PPR_2
PPR
PPR_3
PPR_1
PPR_2
PPR
PPR_3
PPR_1
PPR
TPR_24
PPR_2
PPR
PPR_3
PPR_1
PPR
PPR_2
PPR_1
PPR
PPR_3
PPR_2
PPR
PPR_3
PPR_2
PPR
C
PF13812 PPR_3 53-110 aa PF01535 PPR 69-97 aa PF01535 PPR 139-164 aa PF13041 PPR_2 171-220 aa PF01535 PPR 178-201 aa PF13812 PPR_3 195-251 aa PF12854 PPR_1 204-234 aa PF13041 PPR_2 209-255 aa PF01535 PPR 210-239 aa PF12854 PPR_1 237-261 aa PF13041 PPR_2 242-291 aa PF01535 PPR 244-266 aa PF13812 PPR_3 269-322 aa PF12854 PPR_1 275-306 aa PF13041 PPR_2 278-325 aa PF01535 PPR 280-309 aa PF13812 PPR_3 301-344 aa PF12854 PPR_1 312-338 aa PF13041 PPR_2 312-353 aa PF01535 PPR 315-345 aa PF13812 PPR_3 340-393 aa PF12854 PPR_1 344-374 aa PF01535 PPR 351-379 aa PF23276 TPR_24 375-474 aa PF13041 PPR_2 384-431 aa PF01535 PPR 385-413 aa PF13812 PPR_3 405-462 aa PF12854 PPR_1 415-446 aa PF01535 PPR 421-450 aa PF13041 PPR_2 421-466 aa PF12854 PPR_1 448-478 aa PF01535 PPR 455-485 aa PF13812 PPR_3 480-531 aa PF13041 PPR_2 488-530 aa PF01535 PPR 491-520 aa PF13812 PPR_3 510-565 aa PF13041 PPR_2 522-569 aa PF01535 PPR 525-555 aa
XP_057788742.1
562 aa
N
1
281
562
PPR_3
PPR
PPR
PPR_2
TPR_24
PPR
PPR_3
PPR_1
PPR
PPR_2
PPR_1
PPR_2
PPR
PPR_3
PPR_1
PPR_2
PPR
PPR_3
PPR_1
PPR_2
PPR
PPR_3
PPR_1
PPR
PPR_2
PPR
PPR_3
PPR_1
PPR
PPR_2
PPR_1
PPR
PPR_3
PPR_2
PPR
PPR
C
PF13812 PPR_3 53-110 aa PF01535 PPR 69-97 aa PF01535 PPR 139-164 aa PF13041 PPR_2 171-220 aa PF23276 TPR_24 175-253 aa PF01535 PPR 178-201 aa PF13812 PPR_3 195-251 aa PF12854 PPR_1 204-234 aa PF01535 PPR 210-239 aa PF13041 PPR_2 210-255 aa PF12854 PPR_1 237-261 aa PF13041 PPR_2 241-291 aa PF01535 PPR 244-266 aa PF13812 PPR_3 269-322 aa PF12854 PPR_1 275-306 aa PF13041 PPR_2 278-325 aa PF01535 PPR 280-309 aa PF13812 PPR_3 301-344 aa PF12854 PPR_1 312-338 aa PF13041 PPR_2 312-353 aa PF01535 PPR 315-345 aa PF13812 PPR_3 340-393 aa PF12854 PPR_1 344-374 aa PF01535 PPR 351-379 aa PF13041 PPR_2 384-431 aa PF01535 PPR 385-413 aa PF13812 PPR_3 405-462 aa PF12854 PPR_1 415-446 aa PF01535 PPR 421-450 aa PF13041 PPR_2 421-466 aa PF12854 PPR_1 448-478 aa PF01535 PPR 455-485 aa PF13812 PPR_3 480-531 aa PF13041 PPR_2 488-530 aa PF01535 PPR 491-520 aa PF01535 PPR 525-555 aa
XP_057788743.1
560 aa
N
1
280
560
PPR_3
PPR
PPR
PPR_2
TPR_24
PPR
PPR_3
PPR_1
PPR
PPR_2
PPR_1
PPR_2
PPR
PPR_3
PPR_1
PPR_2
PPR
PPR_3
PPR_1
PPR_2
PPR
PPR_3
PPR_1
PPR
PPR_2
PPR
PPR_3
PPR_1
PPR_2
PPR
PPR_1
PPR
PPR_3
PPR_2
PPR
PPR
C
PF13812 PPR_3 53-110 aa PF01535 PPR 69-97 aa PF01535 PPR 139-164 aa PF13041 PPR_2 171-220 aa PF23276 TPR_24 175-253 aa PF01535 PPR 178-201 aa PF13812 PPR_3 195-251 aa PF12854 PPR_1 204-234 aa PF01535 PPR 210-239 aa PF13041 PPR_2 210-255 aa PF12854 PPR_1 237-261 aa PF13041 PPR_2 241-291 aa PF01535 PPR 244-266 aa PF13812 PPR_3 269-322 aa PF12854 PPR_1 275-306 aa PF13041 PPR_2 278-325 aa PF01535 PPR 280-309 aa PF13812 PPR_3 301-344 aa PF12854 PPR_1 312-338 aa PF13041 PPR_2 312-353 aa PF01535 PPR 315-345 aa PF13812 PPR_3 340-393 aa PF12854 PPR_1 344-374 aa PF01535 PPR 351-379 aa PF13041 PPR_2 384-431 aa PF01535 PPR 385-413 aa PF13812 PPR_3 405-462 aa PF12854 PPR_1 415-446 aa PF13041 PPR_2 417-466 aa PF01535 PPR 421-450 aa PF12854 PPR_1 448-478 aa PF01535 PPR 455-485 aa PF13812 PPR_3 480-531 aa PF13041 PPR_2 488-534 aa PF01535 PPR 491-520 aa PF01535 PPR 525-555 aa
XP_057788744.1
286 aa
N
1
143
286
Alba
Rpp20
C
PF01918 Alba 19-76 aa PF12328 Rpp20 41-111 aa
XP_057788745.1
286 aa
N
1
143
286
Alba
Rpp20
C
PF01918 Alba 19-76 aa PF12328 Rpp20 41-111 aa
XP_057788746.1
286 aa
N
1
143
286
Alba
Rpp20
C
PF01918 Alba 19-76 aa PF12328 Rpp20 41-111 aa
XP_057788747.1
286 aa
N
1
143
286
Alba
Rpp20
C
PF01918 Alba 19-76 aa PF12328 Rpp20 41-111 aa
Protein ID 来源 结构域编号 结构域名称 类型 起始 aa 终止 aa E-value Score 说明
XP_057788739.1 Pfam PF13812 PPR_3 Repeat 53 110 1.5e-53 179.4 Pentatricopeptide repeat domain
XP_057788739.1 Pfam PF01535 PPR Repeat 69 97 3.4e-89 287.8 PPR repeat
XP_057788739.1 Pfam PF01535 PPR Repeat 139 164 3.4e-89 287.8 PPR repeat
XP_057788739.1 Pfam PF13041 PPR_2 Repeat 171 220 4e-120 392.5 PPR repeat family
XP_057788739.1 Pfam PF01535 PPR Repeat 178 201 3.4e-89 287.8 PPR repeat
XP_057788739.1 Pfam PF13812 PPR_3 Repeat 195 251 1.5e-53 179.4 Pentatricopeptide repeat domain
XP_057788739.1 Pfam PF12854 PPR_1 Repeat 204 234 3.5e-98 321.7 PPR repeat
XP_057788739.1 Pfam PF13041 PPR_2 Repeat 209 255 4e-120 392.5 PPR repeat family
XP_057788739.1 Pfam PF01535 PPR Repeat 210 239 3.4e-89 287.8 PPR repeat
XP_057788739.1 Pfam PF12854 PPR_1 Repeat 237 261 3.5e-98 321.7 PPR repeat
XP_057788739.1 Pfam PF13041 PPR_2 Repeat 242 291 4e-120 392.5 PPR repeat family
XP_057788739.1 Pfam PF01535 PPR Repeat 244 266 3.4e-89 287.8 PPR repeat
XP_057788739.1 Pfam PF13812 PPR_3 Repeat 269 322 1.5e-53 179.4 Pentatricopeptide repeat domain
XP_057788739.1 Pfam PF12854 PPR_1 Repeat 275 306 3.5e-98 321.7 PPR repeat
XP_057788739.1 Pfam PF13041 PPR_2 Repeat 278 325 4e-120 392.5 PPR repeat family
XP_057788739.1 Pfam PF01535 PPR Repeat 280 309 3.4e-89 287.8 PPR repeat
XP_057788739.1 Pfam PF13812 PPR_3 Repeat 301 344 1.5e-53 179.4 Pentatricopeptide repeat domain
XP_057788739.1 Pfam PF12854 PPR_1 Repeat 312 338 3.5e-98 321.7 PPR repeat
XP_057788739.1 Pfam PF13041 PPR_2 Repeat 312 353 4e-120 392.5 PPR repeat family
XP_057788739.1 Pfam PF01535 PPR Repeat 315 345 3.4e-89 287.8 PPR repeat
XP_057788739.1 Pfam PF13812 PPR_3 Repeat 340 393 1.5e-53 179.4 Pentatricopeptide repeat domain
XP_057788739.1 Pfam PF12854 PPR_1 Repeat 344 374 3.5e-98 321.7 PPR repeat
XP_057788739.1 Pfam PF01535 PPR Repeat 351 379 3.4e-89 287.8 PPR repeat
XP_057788739.1 Pfam PF23276 TPR_24 Repeat 375 474 4.1e-25 88.9 Pentatricopeptide repeat-containing protein
XP_057788739.1 Pfam PF13041 PPR_2 Repeat 384 431 4e-120 392.5 PPR repeat family
XP_057788739.1 Pfam PF01535 PPR Repeat 385 413 3.4e-89 287.8 PPR repeat
XP_057788739.1 Pfam PF13812 PPR_3 Repeat 405 462 1.5e-53 179.4 Pentatricopeptide repeat domain
XP_057788739.1 Pfam PF12854 PPR_1 Repeat 415 446 3.5e-98 321.7 PPR repeat
XP_057788739.1 Pfam PF01535 PPR Repeat 421 450 3.4e-89 287.8 PPR repeat
XP_057788739.1 Pfam PF13041 PPR_2 Repeat 421 466 4e-120 392.5 PPR repeat family
XP_057788739.1 Pfam PF12854 PPR_1 Repeat 448 478 3.5e-98 321.7 PPR repeat
XP_057788739.1 Pfam PF01535 PPR Repeat 455 485 3.4e-89 287.8 PPR repeat
XP_057788739.1 Pfam PF13812 PPR_3 Repeat 480 531 1.5e-53 179.4 Pentatricopeptide repeat domain
XP_057788739.1 Pfam PF13041 PPR_2 Repeat 488 530 4e-120 392.5 PPR repeat family
XP_057788739.1 Pfam PF01535 PPR Repeat 491 520 3.4e-89 287.8 PPR repeat
XP_057788739.1 Pfam PF13812 PPR_3 Repeat 510 565 1.5e-53 179.4 Pentatricopeptide repeat domain
XP_057788739.1 Pfam PF13041 PPR_2 Repeat 522 569 4e-120 392.5 PPR repeat family
XP_057788739.1 Pfam PF01535 PPR Repeat 525 555 3.4e-89 287.8 PPR repeat
XP_057788741.1 Pfam PF13812 PPR_3 Repeat 53 110 1.5e-53 179.4 Pentatricopeptide repeat domain
XP_057788741.1 Pfam PF01535 PPR Repeat 69 97 3.4e-89 287.8 PPR repeat
XP_057788741.1 Pfam PF01535 PPR Repeat 139 164 3.4e-89 287.8 PPR repeat
XP_057788741.1 Pfam PF13041 PPR_2 Repeat 171 220 4e-120 392.5 PPR repeat family
XP_057788741.1 Pfam PF01535 PPR Repeat 178 201 3.4e-89 287.8 PPR repeat
XP_057788741.1 Pfam PF13812 PPR_3 Repeat 195 251 1.5e-53 179.4 Pentatricopeptide repeat domain
XP_057788741.1 Pfam PF12854 PPR_1 Repeat 204 234 3.5e-98 321.7 PPR repeat
XP_057788741.1 Pfam PF13041 PPR_2 Repeat 209 255 4e-120 392.5 PPR repeat family
XP_057788741.1 Pfam PF01535 PPR Repeat 210 239 3.4e-89 287.8 PPR repeat
XP_057788741.1 Pfam PF12854 PPR_1 Repeat 237 261 3.5e-98 321.7 PPR repeat
XP_057788741.1 Pfam PF13041 PPR_2 Repeat 242 291 4e-120 392.5 PPR repeat family
XP_057788741.1 Pfam PF01535 PPR Repeat 244 266 3.4e-89 287.8 PPR repeat
XP_057788741.1 Pfam PF13812 PPR_3 Repeat 269 322 1.5e-53 179.4 Pentatricopeptide repeat domain
XP_057788741.1 Pfam PF12854 PPR_1 Repeat 275 306 3.5e-98 321.7 PPR repeat
XP_057788741.1 Pfam PF13041 PPR_2 Repeat 278 325 4e-120 392.5 PPR repeat family
XP_057788741.1 Pfam PF01535 PPR Repeat 280 309 3.4e-89 287.8 PPR repeat
XP_057788741.1 Pfam PF13812 PPR_3 Repeat 301 344 1.5e-53 179.4 Pentatricopeptide repeat domain
XP_057788741.1 Pfam PF12854 PPR_1 Repeat 312 338 3.5e-98 321.7 PPR repeat
XP_057788741.1 Pfam PF13041 PPR_2 Repeat 312 353 4e-120 392.5 PPR repeat family
XP_057788741.1 Pfam PF01535 PPR Repeat 315 345 3.4e-89 287.8 PPR repeat
XP_057788741.1 Pfam PF13812 PPR_3 Repeat 340 393 1.5e-53 179.4 Pentatricopeptide repeat domain
XP_057788741.1 Pfam PF12854 PPR_1 Repeat 344 374 3.5e-98 321.7 PPR repeat
XP_057788741.1 Pfam PF01535 PPR Repeat 351 379 3.4e-89 287.8 PPR repeat
XP_057788741.1 Pfam PF23276 TPR_24 Repeat 375 474 4.1e-25 88.9 Pentatricopeptide repeat-containing protein
XP_057788741.1 Pfam PF13041 PPR_2 Repeat 384 431 4e-120 392.5 PPR repeat family
XP_057788741.1 Pfam PF01535 PPR Repeat 385 413 3.4e-89 287.8 PPR repeat
XP_057788741.1 Pfam PF13812 PPR_3 Repeat 405 462 1.5e-53 179.4 Pentatricopeptide repeat domain
XP_057788741.1 Pfam PF12854 PPR_1 Repeat 415 446 3.5e-98 321.7 PPR repeat
XP_057788741.1 Pfam PF01535 PPR Repeat 421 450 3.4e-89 287.8 PPR repeat
XP_057788741.1 Pfam PF13041 PPR_2 Repeat 421 466 4e-120 392.5 PPR repeat family
XP_057788741.1 Pfam PF12854 PPR_1 Repeat 448 478 3.5e-98 321.7 PPR repeat
XP_057788741.1 Pfam PF01535 PPR Repeat 455 485 3.4e-89 287.8 PPR repeat
XP_057788741.1 Pfam PF13812 PPR_3 Repeat 480 531 1.5e-53 179.4 Pentatricopeptide repeat domain
XP_057788741.1 Pfam PF13041 PPR_2 Repeat 488 530 4e-120 392.5 PPR repeat family
XP_057788741.1 Pfam PF01535 PPR Repeat 491 520 3.4e-89 287.8 PPR repeat
XP_057788741.1 Pfam PF13812 PPR_3 Repeat 510 565 1.5e-53 179.4 Pentatricopeptide repeat domain
XP_057788741.1 Pfam PF13041 PPR_2 Repeat 522 569 4e-120 392.5 PPR repeat family
XP_057788741.1 Pfam PF01535 PPR Repeat 525 555 3.4e-89 287.8 PPR repeat
XP_057788742.1 Pfam PF13812 PPR_3 Repeat 53 110 1.6e-53 179.3 Pentatricopeptide repeat domain
XP_057788742.1 Pfam PF01535 PPR Repeat 69 97 1.4e-89 289.0 PPR repeat
XP_057788742.1 Pfam PF01535 PPR Repeat 139 164 1.4e-89 289.0 PPR repeat
XP_057788742.1 Pfam PF13041 PPR_2 Repeat 171 220 6.7e-119 388.6 PPR repeat family
XP_057788742.1 Pfam PF23276 TPR_24 Repeat 175 253 4.7e-25 88.8 Pentatricopeptide repeat-containing protein
XP_057788742.1 Pfam PF01535 PPR Repeat 178 201 1.4e-89 289.0 PPR repeat
XP_057788742.1 Pfam PF13812 PPR_3 Repeat 195 251 1.6e-53 179.3 Pentatricopeptide repeat domain
XP_057788742.1 Pfam PF12854 PPR_1 Repeat 204 234 1.6e-98 322.8 PPR repeat
XP_057788742.1 Pfam PF01535 PPR Repeat 210 239 1.4e-89 289.0 PPR repeat
XP_057788742.1 Pfam PF13041 PPR_2 Repeat 210 255 6.7e-119 388.6 PPR repeat family
XP_057788742.1 Pfam PF12854 PPR_1 Repeat 237 261 1.6e-98 322.8 PPR repeat
XP_057788742.1 Pfam PF13041 PPR_2 Repeat 241 291 6.7e-119 388.6 PPR repeat family
XP_057788742.1 Pfam PF01535 PPR Repeat 244 266 1.4e-89 289.0 PPR repeat
XP_057788742.1 Pfam PF13812 PPR_3 Repeat 269 322 1.6e-53 179.3 Pentatricopeptide repeat domain
XP_057788742.1 Pfam PF12854 PPR_1 Repeat 275 306 1.6e-98 322.8 PPR repeat
XP_057788742.1 Pfam PF13041 PPR_2 Repeat 278 325 6.7e-119 388.6 PPR repeat family
XP_057788742.1 Pfam PF01535 PPR Repeat 280 309 1.4e-89 289.0 PPR repeat
XP_057788742.1 Pfam PF13812 PPR_3 Repeat 301 344 1.6e-53 179.3 Pentatricopeptide repeat domain
XP_057788742.1 Pfam PF12854 PPR_1 Repeat 312 338 1.6e-98 322.8 PPR repeat
XP_057788742.1 Pfam PF13041 PPR_2 Repeat 312 353 6.7e-119 388.6 PPR repeat family
XP_057788742.1 Pfam PF01535 PPR Repeat 315 345 1.4e-89 289.0 PPR repeat
XP_057788742.1 Pfam PF13812 PPR_3 Repeat 340 393 1.6e-53 179.3 Pentatricopeptide repeat domain
XP_057788742.1 Pfam PF12854 PPR_1 Repeat 344 374 1.6e-98 322.8 PPR repeat
XP_057788742.1 Pfam PF01535 PPR Repeat 351 379 1.4e-89 289.0 PPR repeat
XP_057788742.1 Pfam PF13041 PPR_2 Repeat 384 431 6.7e-119 388.6 PPR repeat family
XP_057788742.1 Pfam PF01535 PPR Repeat 385 413 1.4e-89 289.0 PPR repeat
XP_057788742.1 Pfam PF13812 PPR_3 Repeat 405 462 1.6e-53 179.3 Pentatricopeptide repeat domain
XP_057788742.1 Pfam PF12854 PPR_1 Repeat 415 446 1.6e-98 322.8 PPR repeat
XP_057788742.1 Pfam PF01535 PPR Repeat 421 450 1.4e-89 289.0 PPR repeat
XP_057788742.1 Pfam PF13041 PPR_2 Repeat 421 466 6.7e-119 388.6 PPR repeat family
XP_057788742.1 Pfam PF12854 PPR_1 Repeat 448 478 1.6e-98 322.8 PPR repeat
XP_057788742.1 Pfam PF01535 PPR Repeat 455 485 1.4e-89 289.0 PPR repeat
XP_057788742.1 Pfam PF13812 PPR_3 Repeat 480 531 1.6e-53 179.3 Pentatricopeptide repeat domain
XP_057788742.1 Pfam PF13041 PPR_2 Repeat 488 530 6.7e-119 388.6 PPR repeat family
XP_057788742.1 Pfam PF01535 PPR Repeat 491 520 1.4e-89 289.0 PPR repeat
XP_057788742.1 Pfam PF01535 PPR Repeat 525 555 1.4e-89 289.0 PPR repeat
XP_057788743.1 Pfam PF13812 PPR_3 Repeat 53 110 2.2e-53 178.9 Pentatricopeptide repeat domain
XP_057788743.1 Pfam PF01535 PPR Repeat 69 97 1.3e-89 289.1 PPR repeat
XP_057788743.1 Pfam PF01535 PPR Repeat 139 164 1.3e-89 289.1 PPR repeat
XP_057788743.1 Pfam PF13041 PPR_2 Repeat 171 220 6e-120 392.0 PPR repeat family
XP_057788743.1 Pfam PF23276 TPR_24 Repeat 175 253 5.7e-25 88.5 Pentatricopeptide repeat-containing protein
XP_057788743.1 Pfam PF01535 PPR Repeat 178 201 1.3e-89 289.1 PPR repeat
XP_057788743.1 Pfam PF13812 PPR_3 Repeat 195 251 2.2e-53 178.9 Pentatricopeptide repeat domain
XP_057788743.1 Pfam PF12854 PPR_1 Repeat 204 234 1.5e-98 322.9 PPR repeat
XP_057788743.1 Pfam PF01535 PPR Repeat 210 239 1.3e-89 289.1 PPR repeat
XP_057788743.1 Pfam PF13041 PPR_2 Repeat 210 255 6e-120 392.0 PPR repeat family
XP_057788743.1 Pfam PF12854 PPR_1 Repeat 237 261 1.5e-98 322.9 PPR repeat
XP_057788743.1 Pfam PF13041 PPR_2 Repeat 241 291 6e-120 392.0 PPR repeat family
XP_057788743.1 Pfam PF01535 PPR Repeat 244 266 1.3e-89 289.1 PPR repeat
XP_057788743.1 Pfam PF13812 PPR_3 Repeat 269 322 2.2e-53 178.9 Pentatricopeptide repeat domain
XP_057788743.1 Pfam PF12854 PPR_1 Repeat 275 306 1.5e-98 322.9 PPR repeat
XP_057788743.1 Pfam PF13041 PPR_2 Repeat 278 325 6e-120 392.0 PPR repeat family
XP_057788743.1 Pfam PF01535 PPR Repeat 280 309 1.3e-89 289.1 PPR repeat
XP_057788743.1 Pfam PF13812 PPR_3 Repeat 301 344 2.2e-53 178.9 Pentatricopeptide repeat domain
XP_057788743.1 Pfam PF12854 PPR_1 Repeat 312 338 1.5e-98 322.9 PPR repeat
XP_057788743.1 Pfam PF13041 PPR_2 Repeat 312 353 6e-120 392.0 PPR repeat family
XP_057788743.1 Pfam PF01535 PPR Repeat 315 345 1.3e-89 289.1 PPR repeat
XP_057788743.1 Pfam PF13812 PPR_3 Repeat 340 393 2.2e-53 178.9 Pentatricopeptide repeat domain
XP_057788743.1 Pfam PF12854 PPR_1 Repeat 344 374 1.5e-98 322.9 PPR repeat
XP_057788743.1 Pfam PF01535 PPR Repeat 351 379 1.3e-89 289.1 PPR repeat
XP_057788743.1 Pfam PF13041 PPR_2 Repeat 384 431 6e-120 392.0 PPR repeat family
XP_057788743.1 Pfam PF01535 PPR Repeat 385 413 1.3e-89 289.1 PPR repeat
XP_057788743.1 Pfam PF13812 PPR_3 Repeat 405 462 2.2e-53 178.9 Pentatricopeptide repeat domain
XP_057788743.1 Pfam PF12854 PPR_1 Repeat 415 446 1.5e-98 322.9 PPR repeat
XP_057788743.1 Pfam PF13041 PPR_2 Repeat 417 466 6e-120 392.0 PPR repeat family
XP_057788743.1 Pfam PF01535 PPR Repeat 421 450 1.3e-89 289.1 PPR repeat
XP_057788743.1 Pfam PF12854 PPR_1 Repeat 448 478 1.5e-98 322.9 PPR repeat
XP_057788743.1 Pfam PF01535 PPR Repeat 455 485 1.3e-89 289.1 PPR repeat
XP_057788743.1 Pfam PF13812 PPR_3 Repeat 480 531 2.2e-53 178.9 Pentatricopeptide repeat domain
XP_057788743.1 Pfam PF13041 PPR_2 Repeat 488 534 6e-120 392.0 PPR repeat family
XP_057788743.1 Pfam PF01535 PPR Repeat 491 520 1.3e-89 289.1 PPR repeat
XP_057788743.1 Pfam PF01535 PPR Repeat 525 555 1.3e-89 289.1 PPR repeat
XP_057788744.1 Pfam PF01918 Alba Domain 19 76 1.6e-17 63.7 Alba
XP_057788744.1 Pfam PF12328 Rpp20 Family 41 111 1.6e-07 32.0 Rpp20 subunit of nuclear RNase MRP and P
XP_057788745.1 Pfam PF01918 Alba Domain 19 76 1.6e-17 63.7 Alba
XP_057788745.1 Pfam PF12328 Rpp20 Family 41 111 1.6e-07 32.0 Rpp20 subunit of nuclear RNase MRP and P
XP_057788746.1 Pfam PF01918 Alba Domain 19 76 1.6e-17 63.7 Alba
XP_057788746.1 Pfam PF12328 Rpp20 Family 41 111 1.6e-07 32.0 Rpp20 subunit of nuclear RNase MRP and P
XP_057788747.1 Pfam PF01918 Alba Domain 19 76 1.6e-17 63.7 Alba
XP_057788747.1 Pfam PF12328 Rpp20 Family 41 111 1.6e-07 32.0 Rpp20 subunit of nuclear RNase MRP and P

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

10 records

下载 cDNA FASTA
XR_009095340.1
ATGCCCTAATTCACTTTTATTTTGCAAAAATTGGGAGCTCTCTTCTCTCTTGAGCTGTTGCTCCCACTTCTCTCTAACTCGTGCGTCGGTCTCTTCTCTCTTGAGCCGTCGTTCGCTTCATGTCGGCGCCCCTCGCACGCCGCCTCCTTTCTCACTCGTGCGTCGGTCTCGCCTCCTCCTCTCTCTGGTCTCCACCTCGCCGCTAGTCCAGCACGCAGCACCCGGCGGCGCCAGAACTCACAGCAGGCAGCAGTAAACCA...
XR_009095341.1
ATGCCCTAATTCACTTTTATTTTGCAAAAATTGGGAGCTCTCTTCTCTCTTGAGCTGTTGCTCCCACTTCTCTCTAACTCGTGCGTCGGTCTCTTCTCTCTTGAGCCGTCGTTCGCTTCATGTCGGCGCCCCTCGCACGCCGCCTCCTTTCTCACTCGTGCGTCGGTCTCGCCTCCTCCTCTCTCTGGTCTCCACCTCGCCGCTAGTCCAGCACGCAGCACCCGGCGGCGCCAGAACTCACAGCAGGCAGCAGTAAACCA...

CDS

8 records

下载 CDS FASTA
LOC131005716
ATGATGCGAAAGATCCTTGATTCATCAATCCAGCGGCTTCATAGAGGATTTGCGGCTAAATCCACAGCGTCCCGTGATCTCGATGGGGAAAAGATGCAATTTACACGCACGCCCACGATTGATTTCAGCTGCATACGCTGCGCAGATGATGCCGTTCGTTTGTTTCGCGAAATGATTGCATTGTCGCCGCAGCCTTCCATCCCTGCATACAACAAGCTGTTGAGTATTACGGTCAAATTGGGGGAATACCGAGTTGCCTT...
LOC131005716
ATGATGCGAAAGATCCTTGATTCATCAATCCAGCGGCTTCATAGAGGATTTGCGGCTAAATCCACAGCGTCCCGTGATCTCGATGGGGAAAAGATGCAATTTACACGCACGCCCACGATTGATTTCAGCTGCATACGCTGCGCAGATGATGCCGTTCGTTTGTTTCGCGAAATGATTGCATTGTCGCCGCAGCCTTCCATCCCTGCATACAACAAGCTGTTGAGTATTACGGTCAAATTGGGGGAATACCGAGTTGCCTT...

Protein

8 records

下载 Protein FASTA
XP_057788739.1
MMRKILDSSIQRLHRGFAAKSTASRDLDGEKMQFTRTPTIDFSCIRCADDAVRLFREMIALSPQPSIPAYNKLLSITVKLGEYRVAFYMFDKMRQWGSQLNLCSMGIAINCCCVLHRVDLGFAILGSLFKLGCAPNLTIFSTLLKGLVLVGKIGEAEALFRKIMAFKLCNPNDVMILTVMNGLCKNGQSRTARDLLQVMEKTSLKPNVKAYSAVVDGLCKNSNVDDAMLLVSEMIKKGVSPNIITYNSIIQGLCNLGRWD...
XP_057788741.1
MMRKILDSSIQRLHRGFAAKSTASRDLDGEKMQFTRTPTIDFSCIRCADDAVRLFREMIALSPQPSIPAYNKLLSITVKLGEYRVAFYMFDKMRQWGSQLNLCSMGIAINCCCVLHRVDLGFAILGSLFKLGCAPNLTIFSTLLKGLVLVGKIGEAEALFRKIMAFKLCNPNDVMILTVMNGLCKNGQSRTARDLLQVMEKTSLKPNVKAYSAVVDGLCKNSNVDDAMLLVSEMIKKGVSPNIITYNSIIQGLCNLGRWD...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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