Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr01G005437`

染色体: Chr01 坐标: 71504319-71509382 链方向: + 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr01G005437`
名称	SmilChr01G005437
描述	uncharacterized SmilChr01G005437
染色体 / SeqID	Chr01 / NC_080387.1
坐标与链方向	71504319 - 71509382 / `+`

ID 对照

NCBI Gene ID	`LOC131005766`
GeneID	`131005766`
locus_tag	`-`
NCBI Name	`LOC131005766`
原始查询	`SmilChr01G005437`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; Arabidopsis/Rice homolog
描述	uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:831514]; symbol=AT5G16520; hit=AT5G16520; species=arabidopsis; confidence=high
产物	uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:831514]; symbol=AT5G16520; hit=AT5G16520; species=arabidopsis; confidence=high
Arabidopsis	`AT5G16520` (AT5G16520) uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:831514] identity=55.2; qcov=1; evalue=0; confidence=high
Rice	`Os01g0100500` (P0402A09.1) - identity=49.1; qcov=0.931; evalue=3.9e-164; confidence=high
GO	-
KEGG	-
Pfam	-
InterPro	-
eggNOG	-
NR	GeneID:131005766

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Vacuole	液泡	0.80000	`XP_057788816.1`
2	Vacuole membrane	液泡膜	0.80000	`XP_057788816.1`
3	Endosome	内体	0.20000	`XP_057788816.1`
4	Endosome membrane	内体膜	0.20000	`XP_057788816.1`
5	Nucleus	细胞核	0.00000	`XP_057788817.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr1:71504691`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	B83,C80
`Chr1:71504759`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B130
`Chr1:71504804`	`C`	`T`	EMS_canonical_SNV	CDS_variant	5	B14,B24,B34,B67,C29
`Chr1:71504810`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	C31
`Chr1:71504840`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B104
`Chr1:71504885`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B109
`Chr1:71504895`	`CT`	`C`	1bp_deletion	frameshift_variant	3	B11,B6,C26
`Chr1:71504895`	`CT`	`C`	1bp_deletion	CDS_variant	3	B11,B6,C26
`Chr1:71504911`	`T`	`TC`	1bp_insertion	frameshift_variant	5	A15,C3,C68,C77,C79
`Chr1:71504911`	`T`	`TC`	1bp_insertion	CDS_variant	5	A15,C3,C68,C77,C79
`Chr1:71504918`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B104
`Chr1:71504927`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	C1

进入 EMS 突变库

预测功能结构域

当前发布数据中，此基因没有可展示的 Pfam 结构域命中。

进入结构域查询

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

3 records

下载 cDNA FASTA

XM_057932833.1
CTATCTAATCGTGTAGTAAAACTAATCTGTTTGCTAATTATCTTCTTTATTTAGTCGCGAGAATATGAGATGAAACTAGAAGCTGATAAATTTGTGATGAAAAAGAGAAGAAAAGAAAGAAAAAGGAAAGAATTTAAAAGGCAAGCAAGTGGGAATCAGTGATGCACAGAGGCGAGGCAAGCTTAGTAAAGGCAAGCTGTCAAATTTCCAGATCGAATATGTTCTTCGTCGTTTCTCCCAATCCCAAGCCAAGAAATCAA...

XM_057932834.1
TTATCTTCTTTATTTAGTCGCGAGAATATGAGATGAAACTAGAAGCTGATAAATTTGTGATGAAAAAGAGAAGAAAAGAAAGAAAAAGGAAAGAATTTAAAAGGCAAGCAAGTGGGAATCAGTGATGCACAGAGGCGAGGCAAGCTTAGTAAAGGCAAGCTGTCAAATTTCCAGATCGAATATGTTCTTCGTCGTTTCTCCCAATCCCAAGCCAAGAAATCAATCTGATTGATTCCAAATTTCGTTTCAATTGTGGGTAA...

CDS

3 records

下载 CDS FASTA

LOC131005766
ATGGCATGCCCTTCCAATTCCTTGCTCTACAACGCCACCCTCTGCGCCTGCAACCCAGGCTACCTCTACAACCGGACCTCCAGCGCCTGCGCCCTATTCGCGGCGGAGCCGCCGTTTGTCCAGCTCAGCAGCGGCGTCAGCTACGGCTCCGCCTTCACCTTCCCCGCCGCCATATTCTCCTTCGACTCAATTAAGAAGTTCACGCAGTCGCAGGCCGTGTTTCTGGAGGCCACGCTCGTCATACTCCTCTGCTGGCTCGC...

Protein

3 records

下载 Protein FASTA

XP_057788816.1
MACPSNSLLYNATLCACNPGYLYNRTSSACALFAAEPPFVQLSSGVSYGSAFTFPAAIFSFDSIKKFTQSQAVFLEATLVILLCWLAFCLLLRLFPLGSDGRSAAFKIRWWISRLDVAFATRHWLHDHQPVVKRKTELGGSFSIASWIVFIGLFAALLYQTISKRSVEVHSVRAANAPDLESFLNDMEFNITTISSMSCAQLRGLDTLVTGNPFFIDQRSVRLSTFANYSCLNTSVGPTISIRCSNCRLIRDFAYISWYF...

XP_057788817.1
MACPSNSLLYNATLCACNPGYLYNRTSSACALFAAEPPFVQLSSGVSYGSAFTFPAAIFSFDSIKKFTQSQAVFLEATLVILLCWLAFCLLLRLFPLGSDGRSAAFKIRWWISRLDVAFATRHWLHDHQPVVKRKTELGGSFSIASWIVFIGLFAALLYQTISKRSVEVHSVRAANAPDLESFLNDMEFNITTISSMSCAQLRGLDTLVTGNPFFIDQRSVRLSTFANYSCLNTSVGPTISIRCSNCRLIRDFAYISWYF...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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