当前解析结果
SmilChr01G005474| 统一新 Gene ID | SmilChr01G005474 |
|---|---|
| 名称 | SmilChr01G005474 |
| 描述 | protein ZINC INDUCED FACILITATOR-LIKE 1-like |
| 染色体 / SeqID | Chr01 / NC_080387.1 |
| 坐标与链方向 | 71722317 - 71730941 / - |
| NCBI Gene ID | LOC131005806 |
|---|---|
| GeneID | 131005806 |
| locus_tag | - |
| NCBI Name | LOC131005806 |
| 原始查询 | SmilChr01G005474 |
| 来源 | GFF basic annotation; NCBI GO GAF; Pfam-A/HMMER; Arabidopsis/Rice homolog |
|---|---|
| 描述 | protein ZINC INDUCED FACILITATOR-LIKE 1-like |
| 产物 | protein ZINC INDUCED FACILITATOR-LIKE 1-like |
| Arabidopsis | AT5G13750 (ZIFL1)zinc induced facilitator-like 1 [Source:NCBI gene (formerly Entrezgene);Acc:831220] identity=63; qcov=0.992; evalue=0; confidence=high |
| Rice | Os11g0135900 (OsZIFL7)- identity=60; qcov=0.969; evalue=0; confidence=high |
| GO | GO:0005886 (plasma membrane); GO:0009705 (plant-type vacuole membrane); GO:0022821 (solute:potassium antiporter activity); GO:0055085 (transmembrane transport); GO:0090333 (regulation of stomatal closure) |
| KEGG | - |
| Pfam | PF00083 (Sugar_tr); PF07690 (MFS_1) |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131005806 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Vacuole | 液泡 | 1.00000 | XP_057788876.1 |
| 2 | Vacuole membrane | 液泡膜 | 1.00000 | XP_057788876.1 |
| 3 | Cell membrane | 细胞膜 | 0.20000 | XP_057788876.1 |
| 4 | Nucleus | 细胞核 | 0.00000 | XP_057788876.1 |
| 5 | Chromosome | 染色体 | 0.00000 | XP_057788876.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr1:71722630 |
G |
A |
EMS_canonical_SNV | stop_gained | 13 | A11,B10,B110,B23,B33,B51,B59,B82,B87,C22,C53,C60,D6 |
Chr1:71722679 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | A25,B27,B63 |
Chr1:71723018 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | A25,B27,B63 |
Chr1:71723902 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C61 |
Chr1:71724055 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | D11 |
Chr1:71724094 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B122 |
Chr1:71725072 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B1,C58 |
Chr1:71725850 |
C |
T |
EMS_canonical_SNV | CDS_variant | 5 | A14,B125,B90,C14,C33 |
Chr1:71725862 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B34 |
Chr1:71727950 |
C |
T |
EMS_canonical_SNV | CDS_variant | 5 | B108,B71,C23,C62,C80 |
Chr1:71728109 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | B128,B75,B88,C10,C3 |
Chr1:71728145 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | A25,B131,B27,B63 |
结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan;位置为对应蛋白序列上的氨基酸坐标。
XP_057788876.1PF07690
MFS_1 43-434 aa
PF00083
Sugar_tr 66-238 aa
| Protein ID | 来源 | 结构域编号 | 结构域名称 | 类型 | 起始 aa | 终止 aa | E-value | Score | 说明 |
|---|---|---|---|---|---|---|---|---|---|
XP_057788876.1 |
Pfam | PF07690 |
MFS_1 | Family | 43 | 434 | 7.5e-34 | 117.9 | Major Facilitator Superfamily |
XP_057788876.1 |
Pfam | PF00083 |
Sugar_tr | Family | 66 | 238 | 5.9e-13 | 49.2 | Sugar (and other) transporter |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。