当前解析结果
SmilChr01G005483| 统一新 Gene ID | SmilChr01G005483 |
|---|---|
| 名称 | SmilChr01G005483 |
| 描述 | uncharacterized SmilChr01G005483 |
| 染色体 / SeqID | Chr01 / NC_080387.1 |
| 坐标与链方向 | 71792953 - 71796786 / + |
| NCBI Gene ID | LOC131005816 |
|---|---|
| GeneID | 131005816 |
| locus_tag | - |
| NCBI Name | LOC131005816 |
| 原始查询 | SmilChr01G005483 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | Alpha/beta hydrolase related protein [Source:NCBI gene (formerly Entrezgene);Acc:818598]; symbol=AT2G40095; hit=AT2G40095; species=arabidopsis; confidence=high |
| 产物 | Alpha/beta hydrolase related protein [Source:NCBI gene (formerly Entrezgene);Acc:818598]; symbol=AT2G40095; hit=AT2G40095; species=arabidopsis; confidence=high |
| Arabidopsis | AT2G40095 (AT2G40095)Alpha/beta hydrolase related protein [Source:NCBI gene (formerly Entrezgene);Acc:818598] identity=58; qcov=0.937; evalue=5.83e-66; confidence=high |
| Rice | Os03g0123800 (OJ1126B12.18)- identity=45.4; qcov=0.888; evalue=4.24e-27; confidence=medium |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131005816 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Endoplasmic reticulum | 内质网 | 1.00000 | XP_057788892.1 |
| 2 | Endoplasmic reticulum membrane | 内质网膜 | 0.80000 | XP_057788891.1 |
| 3 | Nucleus membrane | 核膜 | 0.20000 | XP_057788891.1 |
| 4 | Cell membrane | 细胞膜 | 0.20000 | XP_057788891.1 |
| 5 | Vacuole | 液泡 | 0.20000 | XP_057788892.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr1:71793201 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B24 |
Chr1:71793240 |
C |
CA |
1bp_insertion | frameshift_variant | 3 | B30,C77,D1 |
Chr1:71793240 |
C |
CA |
1bp_insertion | CDS_variant | 3 | B30,C77,D1 |
Chr1:71793293 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | B131,B5,C26,C85 |
Chr1:71793308 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C30 |
Chr1:71793332 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | B122,B2,B35,B99,C8 |
Chr1:71793382 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B44 |
Chr1:71793434 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B50 |
Chr1:71793549 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C61 |
Chr1:71793584 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C27 |
Chr1:71793674 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | B122,B2,B99,C8 |
Chr1:71793797 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B51,B87 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
2 records
下载 cDNA FASTA2 records
下载 CDS FASTA2 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。