Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr01G005492`

染色体: Chr01 坐标: 71834680-71840005 链方向: - 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr01G005492`
名称	SmilChr01G005492
描述	anthranilate synthase alpha subunit 1, chloroplastic-like
染色体 / SeqID	Chr01 / NC_080387.1
坐标与链方向	71834680 - 71840005 / `-`

ID 对照

NCBI Gene ID	`LOC131005824`
GeneID	`131005824`
locus_tag	`-`
NCBI Name	`LOC131005824`
原始查询	`SmilChr01G005492`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; NCBI GO GAF; KEGG smil; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	anthranilate synthase alpha subunit 1, chloroplastic-like
产物	anthranilate synthase alpha subunit 1%2C chloroplastic-like
Arabidopsis	`AT5G05730` (ASA1) anthranilate synthase alpha subunit 1 [Source:NCBI gene (formerly Entrezgene);Acc:830457] identity=67.8; qcov=0.992; evalue=0; confidence=high
Rice	`Os03g0826500` (OASA1) - identity=63.7; qcov=0.986; evalue=0; confidence=high
GO	GO:0000162 (L-tryptophan biosynthetic process); GO:0004049 (anthranilate synthase activity)
KEGG	smil00400 (Phenylalanine, tyrosine and tryptophan biosynthesis - Salvia miltiorrhiza (redroot sage)); smil01100 (Metabolic pathways - Salvia miltiorrhiza (redroot sage)); smil01110 (Biosynthesis of secondary metabolites - Salvia miltiorrhiza (redroot sage)); smil01230 (Biosynthesis of amino acids - Salvia miltiorrhiza (redroot sage))
Pfam	PF00425 (Chorismate_bind); PF30495 (Chorismate_bind_2)
InterPro	-
eggNOG	-
NR	GeneID:131005824

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Chloroplast	叶绿体	1.00000	`XP_057788902.1`
2	Chloroplast stroma	叶绿体基质	1.00000	`XP_057788902.1`
3	Nucleus	细胞核	0.00000	`XP_057788902.1`
4	Chromosome	染色体	0.00000	`XP_057788902.1`
5	Centromere	着丝粒	0.00000	`XP_057788902.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr1:71834947`	`C`	`T`	EMS_canonical_SNV	CDS_variant	4	A14,B131,B50,C85
`Chr1:71834964`	`C`	`T`	EMS_canonical_SNV	CDS_variant	3	C3,C30,D7
`Chr1:71834965`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	D10
`Chr1:71834971`	`C`	`T`	EMS_canonical_SNV	CDS_variant	3	B131,B50,C85
`Chr1:71835058`	`G`	`A`	EMS_canonical_SNV	CDS_variant	2	B131,C85
`Chr1:71835077`	`C`	`T`	EMS_canonical_SNV	CDS_variant	5	B132,B44,B83,C59,C80
`Chr1:71835112`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B104
`Chr1:71835118`	`G`	`A`	EMS_canonical_SNV	CDS_variant	3	A21,B104,B26
`Chr1:71835130`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	C35
`Chr1:71835190`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	C1
`Chr1:71835211`	`G`	`A`	EMS_canonical_SNV	CDS_variant	5	B132,B44,B50,B83,C59
`Chr1:71835253`	`G`	`A`	EMS_canonical_SNV	CDS_variant	2	B24,B82

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057788902.1

616 aa

308

616

Chorismate_bind

Chorismate_bind_2

PF00425 Chorismate_bind 169-570 aa PF30495 Chorismate_bind_2 289-574 aa

XP_057788903.1

589 aa

294

589

Chorismate_bind

Chorismate_bind_2

Chorismate_bind

Chorismate_bind_2

PF00425 Chorismate_bind 169-422 aa PF30495 Chorismate_bind_2 289-413 aa PF00425 Chorismate_bind 421-543 aa PF30495 Chorismate_bind_2 421-547 aa

Protein ID	来源	结构域编号	结构域名称	类型	起始 aa	终止 aa	E-value	Score	说明
`XP_057788902.1`	Pfam	`PF00425`	Chorismate_bind	Domain	169	570	6.2e-108	362.5	chorismate binding enzyme
`XP_057788902.1`	Pfam	`PF30495`	Chorismate_bind_2	Domain	289	574	8.4e-41	141.2	Chorismate binding enzyme
`XP_057788903.1`	Pfam	`PF00425`	Chorismate_bind	Domain	169	422	1.1e-86	292.5	chorismate binding enzyme
`XP_057788903.1`	Pfam	`PF30495`	Chorismate_bind_2	Domain	289	413	1.2e-33	117.6	Chorismate binding enzyme
`XP_057788903.1`	Pfam	`PF00425`	Chorismate_bind	Domain	421	543	1.1e-86	292.5	chorismate binding enzyme
`XP_057788903.1`	Pfam	`PF30495`	Chorismate_bind_2	Domain	421	547	1.2e-33	117.6	Chorismate binding enzyme

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

2 records

下载 cDNA FASTA

XM_057932920.1
CAGATTTTCTTAAAAGGCCATCTCTCTTTCCCTCTCTCTCTCTCTCACACACACACACACTCTCACAGTGAGACCACCGCAAGTTCCTAGAGAGTGATTCCAATGCAAATGCAAGCTTTAACGTTCTCTCAGAGGCCATCTCCGGCGATATGGAGGCCACCGCCGGCGACCTCCGCCGCCGCCATTTCCGGAAGAAGCGGGAGCTCTGCCGTCACGTTCCGGCTCCGTACATTCCAGTGCTGTTCTTCGAGAACTCCTTC...

XM_057932919.1
AGATTTTCTTAAAAGGCCATCTCTCTTTCCCTCTCTCTCTCTCTCACACACACACACACTCTCACAGTGAGACCACCGCAAGTTCCTAGAGAGTGATTCCAATGCAAATGCAAGCTTTAACGTTCTCTCAGAGGCCATCTCCGGCGATATGGAGGCCACCGCCGGCGACCTCCGCCGCCGCCATTTCCGGAAGAAGCGGGAGCTCTGCCGTCACGTTCCGGCTCCGTACATTCCAGTGCTGTTCTTCGAGAACTCCTTCT...

CDS

2 records

下载 CDS FASTA

LOC131005824
ATGCAAATGCAAGCTTTAACGTTCTCTCAGAGGCCATCTCCGGCGATATGGAGGCCACCGCCGGCGACCTCCGCCGCCGCCATTTCCGGAAGAAGCGGGAGCTCTGCCGTCACGTTCCGGCTCCGTACATTCCAGTGCTGTTCTTCGAGAACTCCTTCTCTAGAGGTGGATAAGAAGAGGTTTGTTGAAGCATCTGAAAATGGAAACTTAATTCCGCTGTACAGATGCATATTCTCGGATCATTTGACGCCGGTGTTGGC...

Protein

2 records

下载 Protein FASTA

XP_057788902.1
MQMQALTFSQRPSPAIWRPPPATSAAAISGRSGSSAVTFRLRTFQCCSSRTPSLEVDKKRFVEASENGNLIPLYRCIFSDHLTPVLAYRCLVKEDDREAPSFLFESVEPGFRASSVGRYSVVGAQPAIEVLAKENQVTILDHGSGKIIEKSVEDPMSIPRSISENWSPQLVEDLPDAFCGGWVGFFSYDTIRYSEKKKLPFSCAPEDDRNLPDIHLGLYDDVIIFDHVDKKAYIIHWVRLDQYSSAQKAYDDGMKRLETL...

XP_057788903.1
MQMQALTFSQRPSPAIWRPPPATSAAAISGRSGSSAVTFRLRTFQCCSSRTPSLEVDKKRFVEASENGNLIPLYRCIFSDHLTPVLAYRCLVKEDDREAPSFLFESVEPGFRASSVGRYSVVGAQPAIEVLAKENQVTILDHGSGKIIEKSVEDPMSIPRSISENWSPQLVEDLPDAFCGGWVGFFSYDTIRYSEKKKLPFSCAPEDDRNLPDIHLGLYDDVIIFDHVDKKAYIIHWVRLDQYSSAQKAYDDGMKRLETL...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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