Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr01G005626`

染色体: Chr01 坐标: 72726943-72733229 链方向: + 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr01G005626`
名称	SmilChr01G005626
描述	folylpolyglutamate synthase
染色体 / SeqID	Chr01 / NC_080387.1
坐标与链方向	72726943 - 72733229 / `+`

ID 对照

NCBI Gene ID	`LOC131005890`
GeneID	`131005890`
locus_tag	`-`
NCBI Name	`LOC131005890`
原始查询	`SmilChr01G005626`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; NCBI GO GAF; KEGG smil; Arabidopsis/Rice homolog
描述	folylpolyglutamate synthase
产物	folylpolyglutamate synthase
Arabidopsis	`AT5G05980` (DFB) DHFS-FPGS homolog B [Source:NCBI gene (formerly Entrezgene);Acc:830484] identity=67.5; qcov=0.979; evalue=0; confidence=high
Rice	`Os03g0111100` - identity=63.4; qcov=0.983; evalue=0; confidence=high
GO	GO:0004326 (tetrahydrofolylpolyglutamate synthase activity); GO:0005524 (ATP binding); GO:0005737 (cytoplasm); GO:0005739 (mitochondrion); GO:0005829 (cytosol); GO:0046901 (tetrahydrofolylpolyglutamate biosynthetic process)
KEGG	smil00790 (Folate biosynthesis - Salvia miltiorrhiza (redroot sage)); smil01100 (Metabolic pathways - Salvia miltiorrhiza (redroot sage)); smil01240 (Biosynthesis of cofactors - Salvia miltiorrhiza (redroot sage)); smil04981 (Folate transport and metabolism - Salvia miltiorrhiza (redroot sage))
Pfam	-
InterPro	-
eggNOG	-
NR	GeneID:131005890

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Cytosol	细胞质基质	1.00000	`XP_057788989.1`
2	Cytoplasm	细胞质	0.80000	`XP_057788989.1`
3	Peroxisome	过氧化物酶体	0.20000	`XP_057788990.1`
4	Nucleus	细胞核	0.00000	`XP_057788989.1`
5	Chromosome	染色体	0.00000	`XP_057788989.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr1:72728226`	`G`	`A`	EMS_canonical_SNV	CDS_variant	3	B133,B7,C34
`Chr1:72728569`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B118
`Chr1:72728601`	`G`	`A`	EMS_canonical_SNV	CDS_variant	3	B60,C12,C54
`Chr1:72731144`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	A20,B132
`Chr1:72731158`	`C`	`T`	EMS_canonical_SNV	CDS_variant	5	B125,B78,B90,B92,C82
`Chr1:72731245`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	C51
`Chr1:72731327`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	B94,C4
`Chr1:72732230`	`G`	`A`	EMS_canonical_SNV	CDS_variant	2	B7,C34
`Chr1:72732396`	`G`	`A`	EMS_canonical_SNV	CDS_variant	3	B6,C53,D8
`Chr1:72732515`	`G`	`A`	EMS_canonical_SNV	CDS_variant	4	B111,C33,D10,D4
`Chr1:72733021`	`G`	`A`	EMS_canonical_SNV	CDS_variant	5	A5,B98,C27,C64,C66

进入 EMS 突变库

预测功能结构域

当前发布数据中，此基因没有可展示的 Pfam 结构域命中。

进入结构域查询

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

2 records

下载 cDNA FASTA

XM_057933006.1
TTTTTATTACTAATATAAGTTTGTATGGTCATTCCCAAACAAGGAAACATCATAATTATTAGGGATGTACCGATATAATAATAAATCCATAATTTTAGGAGTGAATGGAGTATACTGCATCTTTTTTTTTTTTTTTTTTTTCAGGTGTCTCGAATCTTACCAAATGGCTTACTCTATTAAAAGCCCAAAACCAAAATAGCAAATGCTAGAAATTTGGACCCAACTCAACTCGACGTCTCAGCCCAATATTTTAGGCCCGC...

XM_057933007.1
TTTTTATTACTAATATAAGTTTGTATGGTCATTCCCAAACAAGGAAACATCATAATTATTAGGGATGTACCGATATAATAATAAATCCATAATTTTAGGAGTGAATGGAGTATACTGCATCTTTTTTTTTTTTTTTTTTTTCAGGTGTCTCGAATCTTACCAAATGGCTTACTCTATTAAAAGCCCAAAACCAAAATAGCAAATGCTAGAAATTTGGACCCAACTCAACTCGACGTCTCAGCCCAATATTTTAGGCCCGC...

CDS

2 records

下载 CDS FASTA

LOC131005890
ATGTCGCAAGAAGGAGATGGATCAGCAGACACTGTGCTGTCTCCATACGATGACGCGATGGAGGCTCTGTCTTCACTGATAACAAAGCGCAGCCGAGCTGATAAGAGCAACAATGGGGATCGATTCGACATATTGTTTGACTACATTAAGATGCTCGAACTAGAGGAGCCAATAAAACAGATGAAGGTTATTCACGTGGCAGGCACCAAAGGAAAGGGGTCGACTTGCACTTTCACAGAATCTATTCTACGTTGCTGCGG...

LOC131005890
ATGTCGCAAGGAGATGGATCAGCAGACACTGTGCTGTCTCCATACGATGACGCGATGGAGGCTCTGTCTTCACTGATAACAAAGCGCAGCCGAGCTGATAAGAGCAACAATGGGGATCGATTCGACATATTGTTTGACTACATTAAGATGCTCGAACTAGAGGAGCCAATAAAACAGATGAAGGTTATTCACGTGGCAGGCACCAAAGGAAAGGGGTCGACTTGCACTTTCACAGAATCTATTCTACGTTGCTGCGGCTT...

Protein

2 records

下载 Protein FASTA

XP_057788989.1
MSQEGDGSADTVLSPYDDAMEALSSLITKRSRADKSNNGDRFDILFDYIKMLELEEPIKQMKVIHVAGTKGKGSTCTFTESILRCCGFHTGLFTSPHLIDVRERFRLDGSDICEDKFLEYFWWCWDRLKERTSNEVPMPTYFRFLALLAFKIFAAEQVDVVILEVGLGGKFDATNVVENPVVCGIASLGYDHMEILGNTLGQIAGEKAGIFKRGVPAFTVPQPEEAMTVLVQKASELDVNLQAADPLDPSLLTDVHLGLE...

XP_057788990.1
MSQGDGSADTVLSPYDDAMEALSSLITKRSRADKSNNGDRFDILFDYIKMLELEEPIKQMKVIHVAGTKGKGSTCTFTESILRCCGFHTGLFTSPHLIDVRERFRLDGSDICEDKFLEYFWWCWDRLKERTSNEVPMPTYFRFLALLAFKIFAAEQVDVVILEVGLGGKFDATNVVENPVVCGIASLGYDHMEILGNTLGQIAGEKAGIFKRGVPAFTVPQPEEAMTVLVQKASELDVNLQAADPLDPSLLTDVHLGLEG...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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