Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr01G005755`

染色体: Chr01 坐标: 73641169-73645185 链方向: - 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr01G005755`
名称	SmilChr01G005755
描述	glutathione S-transferase DHAR2-like
染色体 / SeqID	Chr01 / NC_080387.1
坐标与链方向	73641169 - 73645185 / `-`

ID 对照

NCBI Gene ID	`LOC131005988`
GeneID	`131005988`
locus_tag	`-`
NCBI Name	`LOC131005988`
原始查询	`SmilChr01G005755`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; NCBI GO GAF; KEGG smil; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	glutathione S-transferase DHAR2-like
产物	glutathione S-transferase DHAR2-like
Arabidopsis	`AT1G75270` (DHAR2) dehydroascorbate reductase 2 [Source:NCBI gene (formerly Entrezgene);Acc:843864] identity=69.5; qcov=1; evalue=1.11e-109; confidence=high
Rice	`Os05g0116100` (OsDHAR1) - identity=70.4; qcov=1; evalue=5.03e-109; confidence=high
GO	GO:0010731 (protein glutathionylation); GO:0033355 (ascorbate glutathione cycle); GO:0045174 (glutathione dehydrogenase (ascorbate) activity); GO:0098869 (cellular oxidant detoxification)
KEGG	smil00053 (Ascorbate and aldarate metabolism - Salvia miltiorrhiza (redroot sage)); smil00480 (Glutathione metabolism - Salvia miltiorrhiza (redroot sage)); smil01100 (Metabolic pathways - Salvia miltiorrhiza (redroot sage))
Pfam	PF00043 (GST_C); PF02798 (GST_N); PF13409 (GST_N_2); PF13410 (GST_C_2); PF13417 (GST_N_3); PF22441 (CLIC-like_N)
InterPro	-
eggNOG	-
NR	GeneID:131005988

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Cytosol	细胞质基质	1.00000	`XP_057789122.1`
2	Cytoplasm	细胞质	0.60000	`XP_057789122.1`
3	Nucleus	细胞核	0.00000	`XP_057789122.1`
4	Chromosome	染色体	0.00000	`XP_057789122.1`
5	Centromere	着丝粒	0.00000	`XP_057789122.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr1:73642041`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B104
`Chr1:73642250`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	C13
`Chr1:73643128`	`C`	`T`	EMS_canonical_SNV	CDS_variant	4	B113,B134,B78,C79
`Chr1:73643159`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	C60
`Chr1:73643212`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B24
`Chr1:73643603`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B104

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057789122.1

220 aa

110

220

CLIC-like_N

GST_N

GST_N_3

GST_N_2

GST_C

GST_C_2

PF22441 CLIC-like_N 3-84 aa PF02798 GST_N 19-77 aa PF13417 GST_N_3 19-87 aa PF13409 GST_N_2 20-82 aa PF00043 GST_C 114-177 aa PF13410 GST_C_2 120-182 aa

XP_057789123.1

212 aa

106

212

CLIC-like_N

GST_N

GST_N_3

GST_N_2

GST_C

GST_C_2

PF22441 CLIC-like_N 3-84 aa PF02798 GST_N 19-77 aa PF13417 GST_N_3 19-87 aa PF13409 GST_N_2 20-82 aa PF00043 GST_C 114-189 aa PF13410 GST_C_2 120-182 aa

Protein ID	来源	结构域编号	结构域名称	类型	起始 aa	终止 aa	E-value	Score	说明
`XP_057789122.1`	Pfam	`PF22441`	CLIC-like_N	Domain	3	84	8.7e-10	39.4	CLIC-like N-terminal domain
`XP_057789122.1`	Pfam	`PF02798`	GST_N	Domain	19	77	6.3e-07	30.3	Glutathione S-transferase, N-terminal domain
`XP_057789122.1`	Pfam	`PF13417`	GST_N_3	Domain	19	87	1.4e-17	64.5	Glutathione S-transferase, N-terminal domain
`XP_057789122.1`	Pfam	`PF13409`	GST_N_2	Domain	20	82	4.9e-18	66.2	Glutathione S-transferase, N-terminal domain
`XP_057789122.1`	Pfam	`PF00043`	GST_C	Domain	114	177	6.2e-05	23.9	Glutathione S-transferase, C-terminal domain
`XP_057789122.1`	Pfam	`PF13410`	GST_C_2	Domain	120	182	1.7e-08	35.1	Glutathione S-transferase, C-terminal domain
`XP_057789123.1`	Pfam	`PF22441`	CLIC-like_N	Domain	3	84	7.6e-10	39.5	CLIC-like N-terminal domain
`XP_057789123.1`	Pfam	`PF02798`	GST_N	Domain	19	77	5.5e-07	30.5	Glutathione S-transferase, N-terminal domain
`XP_057789123.1`	Pfam	`PF13417`	GST_N_3	Domain	19	87	1.3e-17	64.6	Glutathione S-transferase, N-terminal domain
`XP_057789123.1`	Pfam	`PF13409`	GST_N_2	Domain	20	82	4.2e-18	66.4	Glutathione S-transferase, N-terminal domain
`XP_057789123.1`	Pfam	`PF00043`	GST_C	Domain	114	189	1.9e-05	25.5	Glutathione S-transferase, C-terminal domain
`XP_057789123.1`	Pfam	`PF13410`	GST_C_2	Domain	120	182	1.8e-08	35.1	Glutathione S-transferase, C-terminal domain

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

2 records

下载 cDNA FASTA

XM_057933140.1
TTTCTTTTTCATCTCTAGCTTGTGTATATGTTCTTATTGTGAGATGTGTCTAGATCTGATTTAAATCCGTATTCAATGATGTATTTACAATAAAAATGTGGATTTGGATCACATTTAAAAAAATGTAGATTTGGATCTTGATTTTTTTATTATAAAGAAGTCATTGAAATACGAGTTTAGATCTGGATCTTGGATTCATTATTTTCACGCAAGTGTTTGTCTTCGAAATTTATCTTTGATTTCTACGGAAAAAAAAAAAA...

XM_057933139.1
GCGGCCACTGTGTCTTCATCACTCTCCCACACTTCACTCTCACATCCCATTCTCGATTCTTCTCTCTCATCTGTCTGCTAGAGGTTTTCACAAACACCTTCTACCCATGGCTGTCGAGATCTGCGTCAAGGCTGCTGCTGGAGCCCCCGACATTGTCGGAGACTGCCCCTTTTGCCAGAGGGTGCTGCTGACTTTGGAGGAGAAGAAAGTCGAGTACAAGCTGCATTTGATCAGCTTCGACGCCAAGCCCCAGTGGTTTA...

CDS

2 records

下载 CDS FASTA

LOC131005988
ATGGCTGTCGAGATCTGCGTCAAGGCTGCTGCTGGAGCCCCCGACATTGTCGGAGACTGCCCCTTTTGCCAGAGGGTGCTGCTGACTTTGGAGGAGAAGAAAGTCGAGTACAAGCTGCATTTGATCAGCTTCGACGCCAAGCCCCAGTGGTTTATGGAAGTGAATCCAGAAGGGAAGGTGCCGCTCATAAAGTTGGATGACAAGTGGATTTCTGATTCTGATGTTATTGTTGGTATTTTGGAGGAGAAATACCCAAATCC...

Protein

2 records

下载 Protein FASTA

XP_057789122.1
MAVEICVKAAAGAPDIVGDCPFCQRVLLTLEEKKVEYKLHLISFDAKPQWFMEVNPEGKVPLIKLDDKWISDSDVIVGILEEKYPNPSLATPAEVSSVGSKIFSSFVKFLKSKDPSDGSEQALLDELKALEEHLKTKGPYINGENISAADLNLAPKLYHLDVTLGHFKGWAIPESLTHVHNYKKVFQYIITNLFPCGLLSFCNMWIDAQYLGQLSTIYRV

XP_057789123.1
MAVEICVKAAAGAPDIVGDCPFCQRVLLTLEEKKVEYKLHLISFDAKPQWFMEVNPEGKVPLIKLDDKWISDSDVIVGILEEKYPNPSLATPAEVSSVGSKIFSSFVKFLKSKDPSDGSEQALLDELKALEEHLKTKGPYINGENISAADLNLAPKLYHLDVTLGHFKGWAIPESLTHVHNYKKLLYSRESFKKTQAAKEHVVAGWAPKVNA

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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