当前解析结果
SmilChr01G005762| 统一新 Gene ID | SmilChr01G005762 |
|---|---|
| 名称 | SmilChr01G005762 |
| 描述 | uncharacterized SmilChr01G005762 |
| 染色体 / SeqID | Chr01 / NC_080387.1 |
| 坐标与链方向 | 73722201 - 73725074 / - |
| NCBI Gene ID | LOC131006063 |
|---|---|
| GeneID | 131006063 |
| locus_tag | - |
| NCBI Name | LOC131006063 |
| 原始查询 | SmilChr01G005762 |
| 来源 | GFF basic annotation; KEGG smil; Arabidopsis/Rice homolog |
|---|---|
| 描述 | hit=Os12g0209100; species=rice; confidence=high |
| 产物 | hit=Os12g0209100; species=rice; confidence=high |
| Arabidopsis | AT1G26750 (AT1G26750)uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:839216] identity=51.1; qcov=0.989; evalue=1.66e-55; confidence=high |
| Rice | Os12g0209100- identity=60.4; qcov=0.989; evalue=1.48e-68; confidence=high |
| GO | - |
| KEGG | smil03010 (Ribosome - Salvia miltiorrhiza (redroot sage)) |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131006063 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Mitochondrion | 线粒体 | 1.00000 | XP_057789184.1 |
| 2 | Nucleus | 细胞核 | 0.00000 | XP_057789184.1 |
| 3 | Chromosome | 染色体 | 0.00000 | XP_057789184.1 |
| 4 | Centromere | 着丝粒 | 0.00000 | XP_057789184.1 |
| 5 | Chromatin | 染色质 | 0.00000 | XP_057789184.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr1:73722472 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B102,C2,C59 |
Chr1:73722489 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B102,C2,C59 |
Chr1:73722498 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B104 |
Chr1:73722503 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B10,C65,D6 |
Chr1:73722570 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | C24,C40,C85 |
Chr1:73722618 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | C21,C26 |
Chr1:73723896 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B66 |
Chr1:73723940 |
CT |
C |
1bp_deletion | frameshift_variant | 1 | B118 |
Chr1:73723940 |
CT |
C |
1bp_deletion | CDS_variant | 1 | B118 |
Chr1:73723942 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B118,C24 |
Chr1:73723956 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B13,C71,D11 |
Chr1:73724154 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | B127,B139,B49,B95 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。