当前解析结果
SmilChr01G005815| 统一新 Gene ID | SmilChr01G005815 |
|---|---|
| 名称 | SmilChr01G005815 |
| 描述 | uncharacterized SmilChr01G005815 |
| 染色体 / SeqID | Chr01 / NC_080387.1 |
| 坐标与链方向 | 74141894 - 74144092 / + |
| NCBI Gene ID | LOC131006120 |
|---|---|
| GeneID | 131006120 |
| locus_tag | - |
| NCBI Name | LOC131006120 |
| 原始查询 | SmilChr01G005815 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:3767434]; symbol=AT1G51172; hit=AT1G51172; species=arabidopsis; confidence=weak |
| 产物 | uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:3767434]; symbol=AT1G51172; hit=AT1G51172; species=arabidopsis; confidence=weak |
| Arabidopsis | AT1G51172 (AT1G51172)uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:3767434] identity=30.7; qcov=0.275; evalue=3.37e-15; confidence=weak |
| Rice | Os02g0307900- identity=32.1; qcov=0.19; evalue=1.93e-09; confidence=weak |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131006120 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus | 细胞核 | 1.00000 | XP_057789259.1 |
| 2 | Nucleoplasm | 核质 | 0.20000 | XP_057789259.1 |
| 3 | Chromosome | 染色体 | 0.00000 | XP_057789259.1 |
| 4 | Centromere | 着丝粒 | 0.00000 | XP_057789259.1 |
| 5 | Chromatin | 染色质 | 0.00000 | XP_057789259.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr1:74141917 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B108,B57,C36 |
Chr1:74141929 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B13 |
Chr1:74141934 |
G |
GGC |
2bp_insertion | frameshift_variant | 2 | B98,C26 |
Chr1:74141934 |
G |
GGC |
2bp_insertion | CDS_variant | 2 | B98,C26 |
Chr1:74141939 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | B52,C27,C29,C62 |
Chr1:74141964 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C71 |
Chr1:74141967 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B19 |
Chr1:74142019 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B102,C47 |
Chr1:74142024 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B102,B121,C47 |
Chr1:74142060 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | A9 |
Chr1:74142072 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | B11,B86,B90,C31 |
Chr1:74142141 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B1 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。