当前解析结果
SmilChr01G006005| 统一新 Gene ID | SmilChr01G006005 |
|---|---|
| 名称 | SmilChr01G006005 |
| 描述 | protein GAMETE EXPRESSED 1-like |
| 染色体 / SeqID | Chr01 / NC_080387.1 |
| 坐标与链方向 | 75620335 - 75623815 / + |
| NCBI Gene ID | LOC131006263 |
|---|---|
| GeneID | 131006263 |
| locus_tag | - |
| NCBI Name | LOC131006263 |
| 原始查询 | SmilChr01G006005 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | protein GAMETE EXPRESSED 1-like |
| 产物 | protein GAMETE EXPRESSED 1-like |
| Arabidopsis | AT5G55490 (GEX1)gamete expressed protein 1 [Source:NCBI gene (formerly Entrezgene);Acc:835642] identity=40.9; qcov=0.88; evalue=4.2e-133; confidence=medium |
| Rice | Os09g0442400- identity=36.3; qcov=1.07; evalue=7.06e-133; confidence=medium |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131006263 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Endoplasmic reticulum | 内质网 | 1.00000 | XP_057789430.1 |
| 2 | Endoplasmic reticulum membrane | 内质网膜 | 1.00000 | XP_057789430.1 |
| 3 | Nucleus membrane | 核膜 | 0.80000 | XP_057789430.1 |
| 4 | Nucleus inner membrane | Nucleus inner membrane | 0.80000 | XP_057789430.1 |
| 5 | Nucleus | 细胞核 | 0.00000 | XP_057789430.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr1:75620906 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | A6,B130,C82 |
Chr1:75620993 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | A15,C52,C9 |
Chr1:75621001 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C34 |
Chr1:75621050 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B45,B54,C56 |
Chr1:75621116 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C71 |
Chr1:75621128 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C71 |
Chr1:75621164 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | D11 |
Chr1:75621178 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C71 |
Chr1:75621214 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B94 |
Chr1:75621271 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B4 |
Chr1:75621325 |
AC |
A |
1bp_deletion | frameshift_variant | 1 | B117 |
Chr1:75621325 |
AC |
A |
1bp_deletion | CDS_variant | 1 | B117 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。