Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr01G006027`

染色体: Chr01 坐标: 75834858-75837255 链方向: + 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr01G006027`
名称	SmilChr01G006027
描述	prohibitin-1, mitochondrial-like
染色体 / SeqID	Chr01 / NC_080387.1
坐标与链方向	75834858 - 75837255 / `+`

ID 对照

NCBI Gene ID	`LOC131006284`
GeneID	`131006284`
locus_tag	`-`
NCBI Name	`LOC131006284`
原始查询	`SmilChr01G006027`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; NCBI GO GAF; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	prohibitin-1, mitochondrial-like
产物	prohibitin-1%2C mitochondrial-like
Arabidopsis	`AT5G44140` (PHB7) prohibitin 7 [Source:NCBI gene (formerly Entrezgene);Acc:834437] identity=62.5; qcov=0.885; evalue=2.68e-119; confidence=high
Rice	`Os03g0841700` - identity=63.9; qcov=0.881; evalue=1.72e-117; confidence=high
GO	GO:0005739 (mitochondrion); GO:0007005 (mitochondrion organization); GO:0016020 (membrane)
KEGG	-
Pfam	PF01145 (Band_7)
InterPro	-
eggNOG	-
NR	GeneID:131006284

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Mitochondrion	线粒体	0.80000	`XP_057789461.1`
2	Mitochondrion membrane	线粒体膜	0.80000	`XP_057789461.1`
3	Mitochondrion inner membrane	线粒体内膜	0.80000	`XP_057789461.1`
4	Chloroplast	叶绿体	0.20000	`XP_057789461.1`
5	Chloroplast thylakoid	类囊体	0.20000	`XP_057789461.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr1:75835573`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B3
`Chr1:75835587`	`C`	`T`	EMS_canonical_SNV	CDS_variant	5	B109,B49,B82,C14,C28
`Chr1:75835971`	`G`	`A`	EMS_canonical_SNV	CDS_variant	3	B109,C14,C28
`Chr1:75836326`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B82
`Chr1:75836327`	`G`	`A`	EMS_canonical_SNV	CDS_variant	3	B21,B36,B58
`Chr1:75836401`	`G`	`A`	EMS_canonical_SNV	CDS_variant	4	B68,C71,C75,D3
`Chr1:75836704`	`G`	`A`	EMS_canonical_SNV	CDS_variant	2	C49,D11
`Chr1:75836740`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B104
`Chr1:75836815`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	B56,B96
`Chr1:75836848`	`C`	`T`	EMS_canonical_SNV	CDS_variant	4	B21,B61,B97,C40
`Chr1:75837099`	`G`	`A`	EMS_canonical_SNV	CDS_variant	4	A11,B12,C48,C60
`Chr1:75837113`	`G`	`A`	EMS_canonical_SNV	CDS_variant	2	B23,B82

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057789461.1

286 aa

143

286

Band_7

PF01145 Band_7 47-224 aa

XP_057789462.1

286 aa

143

286

Band_7

PF01145 Band_7 47-224 aa

Protein ID	来源	结构域编号	结构域名称	类型	起始 aa	终止 aa	E-value	Score	说明
`XP_057789461.1`	Pfam	`PF01145`	Band_7	Domain	47	224	1.2e-30	107.5	SPFH domain / Band 7 family
`XP_057789462.1`	Pfam	`PF01145`	Band_7	Domain	47	224	1.2e-30	107.5	SPFH domain / Band 7 family

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

2 records

下载 cDNA FASTA

XM_057933479.1
CTCTCTTCTTTTCTCTCTCTCATATTCTAACTTTTTTTAAGATGAATTTTATGTACATGGATGAGCACTTCAAGAAACTTGAAAAGTGGCTTCAAGGACTTCCACCAAAGAAGATAATGGGAATTCAAAGGCGAGTTGCGGCGGCGCTTGGCTTATACCTGTACGGCGCCACCATCTACACCGTCAAACCCGGCCACCGTGCCCTAATTTTCGACCGGCGATCTGGCCTCCAAGATAGGATATATCCAGAAGGAACACAT...

XM_057933478.1
TTTTTATTCTTACATTGTTAATATTTATTATAGAATTATGACATTTTCGAATCTCAAAGAAAAATTCATTTGTTTTTCAAATTCATCTTTTTTTACGCAGTGAATTTTATTTAATGATACCTAGCTAACTGTTAGACTTAGATGAATTTTATGTACATGGATGAGCACTTCAAGAAACTTGAAAAGTGGCTTCAAGGACTTCCACCAAAGAAGATAATGGGAATTCAAAGGCGAGTTGCGGCGGCGCTTGGCTTATACCT...

CDS

2 records

下载 CDS FASTA

LOC131006284
ATGAATTTTATGTACATGGATGAGCACTTCAAGAAACTTGAAAAGTGGCTTCAAGGACTTCCACCAAAGAAGATAATGGGAATTCAAAGGCGAGTTGCGGCGGCGCTTGGCTTATACCTGTACGGCGCCACCATCTACACCGTCAAACCCGGCCACCGTGCCCTAATTTTCGACCGGCGATCTGGCCTCCAAGATAGGATATATCCAGAAGGAACACATTTGAAGATGCCAATTCTTCAAAGGAAAATCGTTTATGATAT...

Protein

2 records

下载 Protein FASTA

XP_057789461.1
MNFMYMDEHFKKLEKWLQGLPPKKIMGIQRRVAAALGLYLYGATIYTVKPGHRALIFDRRSGLQDRIYPEGTHLKMPILQRKIVYDIRAQPYEVKTNSGSRDLQMIDINVRVLSRPVADELPTIYRSLGEKYKDIILPSIVDETVKAVVAQYNASQLLSQREKVSSEIRGVLKERAAKFHIVLDDVSITNLTFGKEFSAAIEAKQVAAQEAERARYVVELAEQEKQSTILQAQGEAKSAELIGRAIANNPAFIALRRIEA...

XP_057789462.1
MNFMYMDEHFKKLEKWLQGLPPKKIMGIQRRVAAALGLYLYGATIYTVKPGHRALIFDRRSGLQDRIYPEGTHLKMPILQRKIVYDIRAQPYEVKTNSGSRDLQMIDINVRVLSRPVADELPTIYRSLGEKYKDIILPSIVDETVKAVVAQYNASQLLSQREKVSSEIRGVLKERAAKFHIVLDDVSITNLTFGKEFSAAIEAKQVAAQEAERARYVVELAEQEKQSTILQAQGEAKSAELIGRAIANNPAFIALRRIEA...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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