当前解析结果
SmilChr01G006069| 统一新 Gene ID | SmilChr01G006069 |
|---|---|
| 名称 | SmilChr01G006069 |
| 描述 | uncharacterized SmilChr01G006069 |
| 染色体 / SeqID | Chr01 / NC_080387.1 |
| 坐标与链方向 | 76091732 - 76096378 / - |
| NCBI Gene ID | LOC131006320 |
|---|---|
| GeneID | 131006320 |
| locus_tag | - |
| NCBI Name | LOC131006320 |
| 原始查询 | SmilChr01G006069 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | Spc97 / Spc98 family of spindle pole body (SBP) component [Source:NCBI gene (formerly Entrezgene);Acc:844365]; symbol=AT1G80245; hit=AT1G80245; species=arabidopsis; confidence=low |
| 产物 | Spc97 / Spc98 family of spindle pole body (SBP) component [Source:NCBI gene (formerly Entrezgene);Acc:844365]; symbol=AT1G80245; hit=AT1G80245; species=arabidopsis; confidence=low |
| Arabidopsis | AT1G80245 (AT1G80245)Spc97 / Spc98 family of spindle pole body (SBP) component [Source:NCBI gene (formerly Entrezgene);Acc:844365] identity=46.1; qcov=0.605; evalue=2.02e-17; confidence=low |
| Rice | Os06g0730500- identity=38.7; qcov=0.481; evalue=2.54e-06; confidence=low |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131006320 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus | 细胞核 | 1.00000 | XP_057789504.1 |
| 2 | Chromosome | 染色体 | 0.80000 | XP_057789504.1 |
| 3 | Centromere | 着丝粒 | 0.00000 | XP_057789504.1 |
| 4 | Chromatin | 染色质 | 0.00000 | XP_057789504.1 |
| 5 | Telomere | 端粒 | 0.00000 | XP_057789504.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr1:76092957 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B35,B59,C45 |
Chr1:76092982 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C82 |
Chr1:76093005 |
GCT |
G |
2bp_deletion | frameshift_variant | 4 | A9,B55,C5,C72 |
Chr1:76093005 |
GCT |
G |
2bp_deletion | CDS_variant | 4 | A9,B55,C5,C72 |
Chr1:76093013 |
A |
AT |
1bp_insertion | frameshift_variant | 4 | A9,B55,C5,C72 |
Chr1:76093013 |
A |
AT |
1bp_insertion | CDS_variant | 4 | A9,B55,C5,C72 |
Chr1:76093015 |
A |
AG |
1bp_insertion | frameshift_variant | 4 | A9,B55,C5,C72 |
Chr1:76093015 |
A |
AG |
1bp_insertion | CDS_variant | 4 | A9,B55,C5,C72 |
Chr1:76093019 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | A9,B55,C5,C72 |
Chr1:76093021 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | A9,B55,C5,C72 |
Chr1:76094876 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B119 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
3 records
下载 cDNA FASTA3 records
下载 CDS FASTA3 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。