Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr02G000107`

染色体: Chr02 坐标: 1369393-1372513 链方向: - 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr02G000107`
名称	SmilChr02G000107
描述	mitochondrial inner membrane protein OXA1-like
染色体 / SeqID	Chr02 / NC_080388.1
坐标与链方向	1369393 - 1372513 / `-`

ID 对照

NCBI Gene ID	`LOC131012488`
GeneID	`131012488`
locus_tag	`-`
NCBI Name	`LOC131012488`
原始查询	`SmilChr02G000107`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; NCBI GO GAF; KEGG smil; Arabidopsis/Rice homolog
描述	mitochondrial inner membrane protein OXA1-like
产物	mitochondrial inner membrane protein OXA1-like
Arabidopsis	`AT2G46470` (OXA1L) inner membrane protein OXA1-like protein [Source:NCBI gene (formerly Entrezgene);Acc:819256] identity=34.2; qcov=1.04; evalue=1.33e-34; confidence=low
Rice	`Os10g0521300` - identity=32.1; qcov=0.718; evalue=2.33e-23; confidence=low
GO	GO:0005743 (mitochondrial inner membrane); GO:0032977 (membrane insertase activity); GO:0032979 (protein insertion into mitochondrial inner membrane from matrix); GO:0033617 (mitochondrial respiratory chain complex IV assembly)
KEGG	smil03060 (Protein export - Salvia miltiorrhiza (redroot sage))
Pfam	-
InterPro	-
eggNOG	-
NR	GeneID:131012488

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Mitochondrion	线粒体	1.00000	`XP_057796447.1`
2	Mitochondrion membrane	线粒体膜	1.00000	`XP_057796447.1`
3	Mitochondrion inner membrane	线粒体内膜	1.00000	`XP_057796448.1`
4	Nucleus	细胞核	0.00000	`XP_057796447.1`
5	Chromosome	染色体	0.00000	`XP_057796447.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr2:1369584`	`C`	`T`	EMS_canonical_SNV	CDS_variant	4	B20,B6,C24,C27
`Chr2:1369625`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B137
`Chr2:1370005`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	B98,C46
`Chr2:1370400`	`G`	`A`	EMS_canonical_SNV	CDS_variant	3	B89,C7,D10
`Chr2:1372253`	`A`	`AT`	1bp_insertion	frameshift_variant	10	B47,B48,B56,B69,B90,C21,C31,C40,C58,C87
`Chr2:1372255`	`AT`	`A`	1bp_deletion	frameshift_variant	14	A19,A25,A6,B105,B110,B139,B35,B42,B43,B52,B72,B79,C68,D8
`Chr2:1372282`	`C`	`CG`	1bp_insertion	frameshift_variant	13	A11,B1,B114,B132,B14,B37,B59,B83,B98,C26,C30,C43,C48
`Chr2:1372300`	`C`	`CAA`	2bp_insertion	frameshift_variant	16	A19,A25,A6,B105,B139,B52,B62,B72,B79,B97,C11,C21,C28,C40,C60,D8

进入 EMS 突变库

预测功能结构域

当前发布数据中，此基因没有可展示的 Pfam 结构域命中。

进入结构域查询

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

5 records

下载 cDNA FASTA

XM_057940464.1
AGCTAGTAAGTTTAATTCCTAAAAAGGAAAGGAATAAAGAGGAAAAGAAAAAGGAAGAAAGTGAATTGCTAACTTAGATCACTCATTATCAGCTTAAAAGCTTTTCCTCTACAGCTTAAAACCTGTGGAGATCCCCCTCATCGCTCAATTCCAAAACCCTAGTAAGATTTTAGTTTTCAGTTTTATGTTAATAAAAGCATGTCGCCTTTTTTTGGGAGATCGTAAACCCCCGTTAAAGATACGCTTGAAAACATTCAATT...

XM_057940465.1
GTAAGTTTAATTCCTAAAAAGGAAAGGAATAAAGAGGAAAAGAAAAAGGAAGAAAGTGAATTGCTAACTTAGATCACTCATTATCAGCTTAAAAGCTTTTCCTCTACAGCTTAAAACCTGTGGAGATCCCCCTCATCGCTCAATTCCAAAACCCTAGTCGCGGAAGTAATGGCGTATAGGCGTAGCATCATAGCTAGAACTAAGTTGTTTTATCAACAGCACCAGCGATTTGCCCCTTCTTTTTCACATATGAGTGGTAG...

CDS

5 records

下载 CDS FASTA

LOC131012488
ATGTTAATAAAAGCATGTCGCCTTTTTTTGGGAGATCGTAAACCCCCGTTAAAGATACGCTTGAAAACATTCAATTTTGAGGTCGCGGAAGTAATGGCGTATAGGCGTAGCATCATAGCTAGAACTAAGTTGTTTTATCAACAGCACCAGCGATTTGCCCCTTCTTTTTCACATATGAGTGGTAGCGATCGCGACGAATTGCCTGCTAAAAGCATTAACAGGAATACTGAGATCCGAAGCCATTTTCGGATTACCGGAAA...

LOC131012488
ATGGCGTATAGGCGTAGCATCATAGCTAGAACTAAGTTGTTTTATCAACAGCACCAGCGATTTGCCCCTTCTTTTTCACATATGAGTGGTAGCGATCGCGACGAATTGCCTGCTAAAAGCATTAACAGGAATACTGAGATCCGAAGCCATTTTCGGATTACCGGAAACATTACCAGCAATTCCCTGCTACCAGGAAGTGTCTCTCGACTCATGCGATCTGAGTTTCGAACAGGCTATGGGCATAATTTCCATAGAAATAT...

Protein

5 records

下载 Protein FASTA

XP_057796447.1
MLIKACRLFLGDRKPPLKIRLKTFNFEVAEVMAYRRSIIARTKLFYQQHQRFAPSFSHMSGSDRDELPAKSINRNTEIRSHFRITGNITSNSLLPGSVSRLMRSEFRTGYGHNFHRNISKVPSDIEGLHDAGDLYGAISAVGEKAVEVAPVVNEAAVAAADSINYLNLIEVFHCCAGLEWWASIAATTVLMRFIFVPSQIYFLQFCSKNFTAIVKHVRHEQISDILNENNEKREAWRKLVSSYDKLHGRGLMASSISGIW...

XP_057796448.1
MAYRRSIIARTKLFYQQHQRFAPSFSHMSGSDRDELPAKSINRNTEIRSHFRITGNITSNSLLPGSVSRLMRSEFRTGYGHNFHRNISKVPSDIEGLHDAGDLYGAISAVGEKAVEVAPVVNEAAVAAADSINYLNLIEVFHCCAGLEWWASIAATTVLMRFIFVPSQIYFLQFCSKNFTAIVKHVRHEQISDILNENNEKREAWRKLVSSYDKLHGRGLMASSISGIWFYVWVSYMANNVPSFTTGGTLWFTDLTACGH...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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