当前解析结果
SmilChr02G000129| 统一新 Gene ID | SmilChr02G000129 |
|---|---|
| 名称 | SmilChr02G000129 |
| 描述 | probable carboxylesterase 7 |
| 染色体 / SeqID | Chr02 / NC_080388.1 |
| 坐标与链方向 | 1754409 - 1755279 / + |
| NCBI Gene ID | LOC131007577 |
|---|---|
| GeneID | 131007577 |
| locus_tag | - |
| NCBI Name | LOC131007577 |
| 原始查询 | SmilChr02G000129 |
| 来源 | GFF basic annotation; NCBI GO GAF; Arabidopsis/Rice homolog |
|---|---|
| 描述 | probable carboxylesterase 7 |
| 产物 | probable carboxylesterase 7 |
| Arabidopsis | AT2G03550 (AT2G03550)alpha/beta-Hydrolases superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:814884] identity=57.1; qcov=0.719; evalue=1.9e-31; confidence=medium |
| Rice | Os06g0214300- identity=48; qcov=0.685; evalue=1.68e-29; confidence=medium |
| GO | GO:0016787 (hydrolase activity) |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131007577 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Cytosol | 细胞质基质 | 1.00000 | XP_057790467.1 |
| 2 | Cytoplasm | 细胞质 | 0.80000 | XP_057790467.1 |
| 3 | Nucleus | 细胞核 | 0.00000 | XP_057790467.1 |
| 4 | Chromosome | 染色体 | 0.00000 | XP_057790467.1 |
| 5 | Centromere | 着丝粒 | 0.00000 | XP_057790467.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr2:1754412 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | B137,B69,C42,D8 |
Chr2:1754429 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C73 |
Chr2:1754430 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | A8,C24,C27 |
Chr2:1754432 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | B64,B80,C14,C82 |
Chr2:1754471 |
C |
CCA |
2bp_insertion | frameshift_variant | 5 | A3,B130,B24,B4,C30 |
Chr2:1754471 |
C |
CCA |
2bp_insertion | CDS_variant | 5 | A3,B130,B24,B4,C30 |
Chr2:1754472 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | A3,B130,B24,B4,C30 |
Chr2:1754477 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B56 |
Chr2:1754540 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B26,B33,D7 |
Chr2:1754596 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | A23,B76 |
Chr2:1754655 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B72 |
Chr2:1754743 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B86 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。