当前解析结果
SmilChr02G000181| 统一新 Gene ID | SmilChr02G000181 |
|---|---|
| 名称 | SmilChr02G000181 |
| 描述 | diacylglycerol kinase 5-like |
| 染色体 / SeqID | Chr02 / NC_080388.1 |
| 坐标与链方向 | 2303750 - 2310998 / - |
| NCBI Gene ID | LOC131012590 |
|---|---|
| GeneID | 131012590 |
| locus_tag | - |
| NCBI Name | LOC131012590 |
| 原始查询 | SmilChr02G000181 |
| 来源 | GFF basic annotation; NCBI GO GAF; KEGG smil; Pfam-A/HMMER; Arabidopsis/Rice homolog |
|---|---|
| 描述 | diacylglycerol kinase 5-like |
| 产物 | diacylglycerol kinase 5-like |
| Arabidopsis | AT2G20900 (DGK5)diacylglycerol kinase 5 [Source:NCBI gene (formerly Entrezgene);Acc:816624] identity=68; qcov=0.992; evalue=0; confidence=high |
| Rice | Os04g0634700 (OsBIDK1)- identity=66.8; qcov=0.982; evalue=0; confidence=high |
| GO | GO:0004143 (ATP-dependent diacylglycerol kinase activity); GO:0007205 (GO:0007205) |
| KEGG | smil00561 (Glycerolipid metabolism - Salvia miltiorrhiza (redroot sage)); smil00564 (Glycerophospholipid metabolism - Salvia miltiorrhiza (redroot sage)); smil01100 (Metabolic pathways - Salvia miltiorrhiza (redroot sage)); smil01110 (Biosynthesis of secondary metabolites - Salvia miltiorrhiza (redroot sage)); smil04070 (Phosphatidylinositol signaling system - Salvia miltiorrhiza (redroot sage)) |
| Pfam | PF00609 (DAGK_acc); PF00781 (DAGK_cat) |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131012590 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Cytosol | 细胞质基质 | 0.80000 | XP_057796556.1 |
| 2 | Cytoplasm | 细胞质 | 0.40000 | XP_057796556.1 |
| 3 | Mitochondrion | 线粒体 | 0.20000 | XP_057796556.1 |
| 4 | Mitochondrion outer membrane | 线粒体外膜 | 0.20000 | XP_057796556.1 |
| 5 | Cell membrane | 细胞膜 | 0.20000 | XP_057796556.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr2:2303779 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B77 |
Chr2:2303822 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B80,C60 |
Chr2:2303915 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | A22,A8,B17,B30 |
Chr2:2303927 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | A24 |
Chr2:2304278 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B27,B81,B9 |
Chr2:2304451 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B128,D8 |
Chr2:2304469 |
C |
T |
EMS_canonical_SNV | CDS_variant | 5 | B10,B135,B44,C16,C39 |
Chr2:2304636 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | B10,B135,B44,C16,C39 |
Chr2:2304805 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B51 |
Chr2:2304820 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B104 |
Chr2:2306563 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | D11 |
Chr2:2309089 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C74 |
结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan;位置为对应蛋白序列上的氨基酸坐标。
XP_057796556.1PF00781
DAGK_cat 41-166 aa
PF00609
DAGK_acc 234-408 aa
| Protein ID | 来源 | 结构域编号 | 结构域名称 | 类型 | 起始 aa | 终止 aa | E-value | Score | 说明 |
|---|---|---|---|---|---|---|---|---|---|
XP_057796556.1 |
Pfam | PF00781 |
DAGK_cat | Family | 41 | 166 | 1.1e-20 | 74.3 | Diacylglycerol kinase catalytic domain |
XP_057796556.1 |
Pfam | PF00609 |
DAGK_acc | Family | 234 | 408 | 3.4e-37 | 129.0 | Diacylglycerol kinase accessory domain |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。