当前解析结果
SmilChr02G000238| 统一新 Gene ID | SmilChr02G000238 |
|---|---|
| 名称 | SmilChr02G000238 |
| 描述 | uncharacterized SmilChr02G000238 |
| 染色体 / SeqID | Chr02 / NC_080388.1 |
| 坐标与链方向 | 3049411 - 3050448 / - |
| NCBI Gene ID | LOC131007838 |
|---|---|
| GeneID | 131007838 |
| locus_tag | - |
| NCBI Name | LOC131007838 |
| 原始查询 | SmilChr02G000238 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | zinc ion binding / nucleic acid binding protein [Source:NCBI gene (formerly Entrezgene);Acc:814629]; symbol=AT2G01050; hit=AT2G01050; species=arabidopsis; confidence=low |
| 产物 | zinc ion binding / nucleic acid binding protein [Source:NCBI gene (formerly Entrezgene);Acc:814629]; symbol=AT2G01050; hit=AT2G01050; species=arabidopsis; confidence=low |
| Arabidopsis | AT2G01050 (AT2G01050)zinc ion binding / nucleic acid binding protein [Source:NCBI gene (formerly Entrezgene);Acc:814629] identity=30.2; qcov=0.432; evalue=1.97e-21; confidence=low |
| Rice | -- |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131007838 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Cytoplasm | 细胞质 | 1.00000 | XP_057790736.1 |
| 2 | Cytoplasmic granule | 细胞质颗粒 | 0.40000 | XP_057790736.1 |
| 3 | Cytoplasmic ribonucleoprotein granule | Cytoplasmic ribonucleoprotein granule | 0.20000 | XP_057790736.1 |
| 4 | Cytosol | 细胞质基质 | 0.20000 | XP_057790736.1 |
| 5 | Nucleus | 细胞核 | 0.00000 | XP_057790736.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr2:3049426 |
C |
T |
EMS_canonical_SNV | CDS_variant | 5 | B25,B60,B76,B99,C16 |
Chr2:3049444 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | C12,C41 |
Chr2:3049454 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | B1,B30,B33,C53 |
Chr2:3049465 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C53 |
Chr2:3049482 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C53 |
Chr2:3049498 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B71,D10 |
Chr2:3049510 |
TG |
T |
1bp_deletion | frameshift_variant | 3 | C26,C41,D4 |
Chr2:3049510 |
TG |
T |
1bp_deletion | CDS_variant | 3 | C26,C41,D4 |
Chr2:3049530 |
C |
T |
EMS_canonical_SNV | CDS_variant | 5 | B17,B41,B82,C61,D1 |
Chr2:3049549 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | D4 |
Chr2:3049550 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | C26,C41 |
Chr2:3049559 |
GC |
G |
1bp_deletion | frameshift_variant | 1 | D4 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。