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中文 EN

Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。
示例

当前解析结果

SmilChr02G000260

染色体: Chr02 坐标: 3336916-3346337 链方向: + 类型: protein_coding

基本信息

统一新 Gene IDSmilChr02G000260
名称SmilChr02G000260
描述uncharacterized SmilChr02G000260
染色体 / SeqIDChr02 / NC_080388.1
坐标与链方向3336916 - 3346337 / +

ID 对照

NCBI Gene IDLOC131007843
GeneID131007843
locus_tag-
NCBI NameLOC131007843
原始查询SmilChr02G000260

查看完整 ID 对照表

功能注释

来源GFF basic annotation; NCBI GO GAF; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述Rf4; symbol=Rf4; hit=Os10g0495200; species=rice; confidence=low
产物Rf4; symbol=Rf4; hit=Os10g0495200; species=rice; confidence=low
ArabidopsisAT1G62670 (RPF2)
rna processing factor 2 [Source:NCBI gene (formerly Entrezgene);Acc:842564]
identity=35.5; qcov=0.389; evalue=7.17e-117; confidence=low
RiceOs10g0495200 (Rf4)
-
identity=32.7; qcov=0.471; evalue=3.63e-122; confidence=low
GOGO:0005515 (protein binding)
KEGG-
PfamPF01535 (PPR); PF12854 (PPR_1); PF13041 (PPR_2); PF13812 (PPR_3); PF23276 (TPR_24)
InterPro-
eggNOG-
NRGeneID:131007843

打开注释模块

亚细胞定位 Top 5

Rank定位位置中文ScoreProtein ID
1 Mitochondrion 线粒体 0.60000 XP_057790740.1
2 Chloroplast 叶绿体 0.40000 XP_057790740.1
3 Nucleus 细胞核 0.00000 XP_057790740.1
4 Chromosome 染色体 0.00000 XP_057790740.1
5 Centromere 着丝粒 0.00000 XP_057790740.1

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置 REF ALT 类型 影响 携带材料数 材料
Chr2:3337039 C T EMS_canonical_SNV CDS_variant 1 A18
Chr2:3337099 C T EMS_canonical_SNV CDS_variant 3 B34,B79,D2
Chr2:3337179 G A EMS_canonical_SNV CDS_variant 1 B132
Chr2:3337314 C T EMS_canonical_SNV CDS_variant 1 B84
Chr2:3337380 G A EMS_canonical_SNV CDS_variant 5 B79,C45,C59,C77,C85
Chr2:3337587 C T EMS_canonical_SNV CDS_variant 4 B103,B24,C81,D4
Chr2:3337661 G GA 1bp_insertion frameshift_variant 3 A24,B103,D2
Chr2:3337661 G GA 1bp_insertion CDS_variant 3 A24,B103,D2
Chr2:3337701 C T EMS_canonical_SNV CDS_variant 2 C32,C68
Chr2:3337949 GAA G 2bp_deletion frameshift_variant 6 A5,A9,B111,B130,B56,B86
Chr2:3337975 G GTC 2bp_insertion frameshift_variant 4 A8,B54,B77,C49
Chr2:3337975 G GTC 2bp_insertion CDS_variant 4 A8,B54,B77,C49

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057790740.1
1559 aa
N
1
780
1559
PPR_2
PPR_3
PPR_2
PPR_1
PPR
PPR_1
PPR_3
PPR_2
PPR
PPR_1
PPR
PPR_1
PPR_3
PPR_2
PPR
PPR_3
PPR_1
PPR_2
PPR
PPR_2
PPR
PPR_3
PPR_1
PPR_2
PPR
PPR_1
PPR_2
PPR
TPR_24
PPR_3
PPR_1
PPR_2
PPR
TPR_24
PPR_1
PPR_2
PPR
PPR_3
PPR_1
PPR_2
PPR
PPR_1
PPR_2
PPR
PPR_3
PPR_1
PPR_2
PPR
TPR_24
PPR_1
PPR_2
PPR
PPR_2
PPR_3
PPR_1
PPR_2
PPR
PPR_1
PPR_2
PPR
PPR_1
PPR_3
PPR_2
PPR
PPR_3
PPR_1
PPR
PPR_1
PPR_3
PPR_2
PPR
PPR_3
PPR_1
PPR_2
PPR
PPR_3
PPR_1
PPR_2
PPR
PPR_3
PPR_2
PPR
PPR_3
PPR_1
PPR
TPR_24
PPR_3
PPR_1
PPR_2
PPR
PPR_3
PPR_1
PPR_2
PPR
PPR_1
PPR_2
PPR
TPR_24
PPR_3
PPR_1
PPR_2
PPR
PPR_1
PPR_2
PPR
PPR_3
PPR_1
PPR_2
PPR
PPR_3
PPR_1
PPR_2
PPR
PPR_1
PPR_2
PPR
C
PF13041 PPR_2 80-127 aa PF13812 PPR_3 144-194 aa PF13041 PPR_2 148-198 aa PF12854 PPR_1 182-209 aa PF01535 PPR 187-213 aa PF12854 PPR_1 221-248 aa PF13812 PPR_3 221-266 aa PF13041 PPR_2 222-271 aa PF01535 PPR 226-255 aa PF12854 PPR_1 253-285 aa PF01535 PPR 260-286 aa PF12854 PPR_1 287-318 aa PF13812 PPR_3 289-336 aa PF13041 PPR_2 289-337 aa PF01535 PPR 292-320 aa PF13812 PPR_3 316-373 aa PF12854 PPR_1 322-349 aa PF13041 PPR_2 324-365 aa PF01535 PPR 327-357 aa PF13041 PPR_2 359-406 aa PF01535 PPR 362-390 aa PF13812 PPR_3 385-439 aa PF12854 PPR_1 391-423 aa PF13041 PPR_2 394-442 aa PF01535 PPR 397-424 aa PF12854 PPR_1 427-458 aa PF13041 PPR_2 429-478 aa PF01535 PPR 433-462 aa PF23276 TPR_24 434-510 aa PF13812 PPR_3 453-511 aa PF12854 PPR_1 460-491 aa PF13041 PPR_2 464-513 aa PF01535 PPR 467-497 aa PF23276 TPR_24 487-595 aa PF12854 PPR_1 495-526 aa PF13041 PPR_2 499-548 aa PF01535 PPR 502-532 aa PF13812 PPR_3 524-578 aa PF12854 PPR_1 530-561 aa PF13041 PPR_2 534-578 aa PF01535 PPR 538-567 aa PF12854 PPR_1 565-596 aa PF13041 PPR_2 569-617 aa PF01535 PPR 572-602 aa PF13812 PPR_3 593-647 aa PF12854 PPR_1 600-633 aa PF13041 PPR_2 604-653 aa PF01535 PPR 607-637 aa PF23276 TPR_24 608-686 aa PF12854 PPR_1 635-667 aa PF13041 PPR_2 639-683 aa PF01535 PPR 642-672 aa PF13041 PPR_2 858-907 aa PF13812 PPR_3 923-974 aa PF12854 PPR_1 924-954 aa PF13041 PPR_2 928-978 aa PF01535 PPR 931-955 aa PF12854 PPR_1 962-989 aa PF13041 PPR_2 964-1015 aa PF01535 PPR 967-993 aa PF12854 PPR_1 998-1027 aa PF13812 PPR_3 998-1046 aa PF13041 PPR_2 1001-1050 aa PF01535 PPR 1005-1034 aa PF13812 PPR_3 1025-1064 aa PF12854 PPR_1 1032-1064 aa PF01535 PPR 1039-1065 aa PF12854 PPR_1 1066-1097 aa PF13812 PPR_3 1068-1115 aa PF13041 PPR_2 1068-1116 aa PF01535 PPR 1071-1098 aa PF13812 PPR_3 1093-1150 aa PF12854 PPR_1 1101-1128 aa PF13041 PPR_2 1103-1152 aa PF01535 PPR 1106-1136 aa PF13812 PPR_3 1126-1184 aa PF12854 PPR_1 1135-1166 aa PF13041 PPR_2 1138-1185 aa PF01535 PPR 1141-1169 aa PF13812 PPR_3 1164-1218 aa PF13041 PPR_2 1173-1221 aa PF01535 PPR 1176-1203 aa PF13812 PPR_3 1196-1253 aa PF12854 PPR_1 1206-1237 aa PF01535 PPR 1212-1241 aa PF23276 TPR_24 1213-1303 aa PF13812 PPR_3 1232-1288 aa PF12854 PPR_1 1239-1270 aa PF13041 PPR_2 1243-1292 aa PF01535 PPR 1246-1276 aa PF13812 PPR_3 1267-1325 aa PF12854 PPR_1 1274-1305 aa PF13041 PPR_2 1278-1323 aa PF01535 PPR 1281-1307 aa PF12854 PPR_1 1309-1340 aa PF13041 PPR_2 1313-1357 aa PF01535 PPR 1316-1346 aa PF23276 TPR_24 1329-1444 aa PF13812 PPR_3 1337-1395 aa PF12854 PPR_1 1344-1375 aa PF13041 PPR_2 1348-1397 aa PF01535 PPR 1351-1381 aa PF12854 PPR_1 1379-1410 aa PF13041 PPR_2 1384-1432 aa PF01535 PPR 1386-1416 aa PF13812 PPR_3 1408-1465 aa PF12854 PPR_1 1414-1445 aa PF13041 PPR_2 1419-1466 aa PF01535 PPR 1421-1451 aa PF13812 PPR_3 1442-1496 aa PF12854 PPR_1 1449-1482 aa PF13041 PPR_2 1453-1502 aa PF01535 PPR 1456-1486 aa PF12854 PPR_1 1484-1516 aa PF13041 PPR_2 1488-1532 aa PF01535 PPR 1491-1521 aa
Protein ID 来源 结构域编号 结构域名称 类型 起始 aa 终止 aa E-value Score 说明
XP_057790740.1 Pfam PF13041 PPR_2 Repeat 80 127 0 1382.7 PPR repeat family
XP_057790740.1 Pfam PF13812 PPR_3 Repeat 144 194 3.2e-156 508.3 Pentatricopeptide repeat domain
XP_057790740.1 Pfam PF13041 PPR_2 Repeat 148 198 0 1382.7 PPR repeat family
XP_057790740.1 Pfam PF12854 PPR_1 Repeat 182 209 0 1126.0 PPR repeat
XP_057790740.1 Pfam PF01535 PPR Repeat 187 213 8.8e-251 794.3 PPR repeat
XP_057790740.1 Pfam PF12854 PPR_1 Repeat 221 248 0 1126.0 PPR repeat
XP_057790740.1 Pfam PF13812 PPR_3 Repeat 221 266 3.2e-156 508.3 Pentatricopeptide repeat domain
XP_057790740.1 Pfam PF13041 PPR_2 Repeat 222 271 0 1382.7 PPR repeat family
XP_057790740.1 Pfam PF01535 PPR Repeat 226 255 8.8e-251 794.3 PPR repeat
XP_057790740.1 Pfam PF12854 PPR_1 Repeat 253 285 0 1126.0 PPR repeat
XP_057790740.1 Pfam PF01535 PPR Repeat 260 286 8.8e-251 794.3 PPR repeat
XP_057790740.1 Pfam PF12854 PPR_1 Repeat 287 318 0 1126.0 PPR repeat
XP_057790740.1 Pfam PF13812 PPR_3 Repeat 289 336 3.2e-156 508.3 Pentatricopeptide repeat domain
XP_057790740.1 Pfam PF13041 PPR_2 Repeat 289 337 0 1382.7 PPR repeat family
XP_057790740.1 Pfam PF01535 PPR Repeat 292 320 8.8e-251 794.3 PPR repeat
XP_057790740.1 Pfam PF13812 PPR_3 Repeat 316 373 3.2e-156 508.3 Pentatricopeptide repeat domain
XP_057790740.1 Pfam PF12854 PPR_1 Repeat 322 349 0 1126.0 PPR repeat
XP_057790740.1 Pfam PF13041 PPR_2 Repeat 324 365 0 1382.7 PPR repeat family
XP_057790740.1 Pfam PF01535 PPR Repeat 327 357 8.8e-251 794.3 PPR repeat
XP_057790740.1 Pfam PF13041 PPR_2 Repeat 359 406 0 1382.7 PPR repeat family
XP_057790740.1 Pfam PF01535 PPR Repeat 362 390 8.8e-251 794.3 PPR repeat
XP_057790740.1 Pfam PF13812 PPR_3 Repeat 385 439 3.2e-156 508.3 Pentatricopeptide repeat domain
XP_057790740.1 Pfam PF12854 PPR_1 Repeat 391 423 0 1126.0 PPR repeat
XP_057790740.1 Pfam PF13041 PPR_2 Repeat 394 442 0 1382.7 PPR repeat family
XP_057790740.1 Pfam PF01535 PPR Repeat 397 424 8.8e-251 794.3 PPR repeat
XP_057790740.1 Pfam PF12854 PPR_1 Repeat 427 458 0 1126.0 PPR repeat
XP_057790740.1 Pfam PF13041 PPR_2 Repeat 429 478 0 1382.7 PPR repeat family
XP_057790740.1 Pfam PF01535 PPR Repeat 433 462 8.8e-251 794.3 PPR repeat
XP_057790740.1 Pfam PF23276 TPR_24 Repeat 434 510 1.2e-75 252.5 Pentatricopeptide repeat-containing protein
XP_057790740.1 Pfam PF13812 PPR_3 Repeat 453 511 3.2e-156 508.3 Pentatricopeptide repeat domain
XP_057790740.1 Pfam PF12854 PPR_1 Repeat 460 491 0 1126.0 PPR repeat
XP_057790740.1 Pfam PF13041 PPR_2 Repeat 464 513 0 1382.7 PPR repeat family
XP_057790740.1 Pfam PF01535 PPR Repeat 467 497 8.8e-251 794.3 PPR repeat
XP_057790740.1 Pfam PF23276 TPR_24 Repeat 487 595 1.2e-75 252.5 Pentatricopeptide repeat-containing protein
XP_057790740.1 Pfam PF12854 PPR_1 Repeat 495 526 0 1126.0 PPR repeat
XP_057790740.1 Pfam PF13041 PPR_2 Repeat 499 548 0 1382.7 PPR repeat family
XP_057790740.1 Pfam PF01535 PPR Repeat 502 532 8.8e-251 794.3 PPR repeat
XP_057790740.1 Pfam PF13812 PPR_3 Repeat 524 578 3.2e-156 508.3 Pentatricopeptide repeat domain
XP_057790740.1 Pfam PF12854 PPR_1 Repeat 530 561 0 1126.0 PPR repeat
XP_057790740.1 Pfam PF13041 PPR_2 Repeat 534 578 0 1382.7 PPR repeat family
XP_057790740.1 Pfam PF01535 PPR Repeat 538 567 8.8e-251 794.3 PPR repeat
XP_057790740.1 Pfam PF12854 PPR_1 Repeat 565 596 0 1126.0 PPR repeat
XP_057790740.1 Pfam PF13041 PPR_2 Repeat 569 617 0 1382.7 PPR repeat family
XP_057790740.1 Pfam PF01535 PPR Repeat 572 602 8.8e-251 794.3 PPR repeat
XP_057790740.1 Pfam PF13812 PPR_3 Repeat 593 647 3.2e-156 508.3 Pentatricopeptide repeat domain
XP_057790740.1 Pfam PF12854 PPR_1 Repeat 600 633 0 1126.0 PPR repeat
XP_057790740.1 Pfam PF13041 PPR_2 Repeat 604 653 0 1382.7 PPR repeat family
XP_057790740.1 Pfam PF01535 PPR Repeat 607 637 8.8e-251 794.3 PPR repeat
XP_057790740.1 Pfam PF23276 TPR_24 Repeat 608 686 1.2e-75 252.5 Pentatricopeptide repeat-containing protein
XP_057790740.1 Pfam PF12854 PPR_1 Repeat 635 667 0 1126.0 PPR repeat
XP_057790740.1 Pfam PF13041 PPR_2 Repeat 639 683 0 1382.7 PPR repeat family
XP_057790740.1 Pfam PF01535 PPR Repeat 642 672 8.8e-251 794.3 PPR repeat
XP_057790740.1 Pfam PF13041 PPR_2 Repeat 858 907 0 1382.7 PPR repeat family
XP_057790740.1 Pfam PF13812 PPR_3 Repeat 923 974 3.2e-156 508.3 Pentatricopeptide repeat domain
XP_057790740.1 Pfam PF12854 PPR_1 Repeat 924 954 0 1126.0 PPR repeat
XP_057790740.1 Pfam PF13041 PPR_2 Repeat 928 978 0 1382.7 PPR repeat family
XP_057790740.1 Pfam PF01535 PPR Repeat 931 955 8.8e-251 794.3 PPR repeat
XP_057790740.1 Pfam PF12854 PPR_1 Repeat 962 989 0 1126.0 PPR repeat
XP_057790740.1 Pfam PF13041 PPR_2 Repeat 964 1015 0 1382.7 PPR repeat family
XP_057790740.1 Pfam PF01535 PPR Repeat 967 993 8.8e-251 794.3 PPR repeat
XP_057790740.1 Pfam PF12854 PPR_1 Repeat 998 1027 0 1126.0 PPR repeat
XP_057790740.1 Pfam PF13812 PPR_3 Repeat 998 1046 3.2e-156 508.3 Pentatricopeptide repeat domain
XP_057790740.1 Pfam PF13041 PPR_2 Repeat 1001 1050 0 1382.7 PPR repeat family
XP_057790740.1 Pfam PF01535 PPR Repeat 1005 1034 8.8e-251 794.3 PPR repeat
XP_057790740.1 Pfam PF13812 PPR_3 Repeat 1025 1064 3.2e-156 508.3 Pentatricopeptide repeat domain
XP_057790740.1 Pfam PF12854 PPR_1 Repeat 1032 1064 0 1126.0 PPR repeat
XP_057790740.1 Pfam PF01535 PPR Repeat 1039 1065 8.8e-251 794.3 PPR repeat
XP_057790740.1 Pfam PF12854 PPR_1 Repeat 1066 1097 0 1126.0 PPR repeat
XP_057790740.1 Pfam PF13812 PPR_3 Repeat 1068 1115 3.2e-156 508.3 Pentatricopeptide repeat domain
XP_057790740.1 Pfam PF13041 PPR_2 Repeat 1068 1116 0 1382.7 PPR repeat family
XP_057790740.1 Pfam PF01535 PPR Repeat 1071 1098 8.8e-251 794.3 PPR repeat
XP_057790740.1 Pfam PF13812 PPR_3 Repeat 1093 1150 3.2e-156 508.3 Pentatricopeptide repeat domain
XP_057790740.1 Pfam PF12854 PPR_1 Repeat 1101 1128 0 1126.0 PPR repeat
XP_057790740.1 Pfam PF13041 PPR_2 Repeat 1103 1152 0 1382.7 PPR repeat family
XP_057790740.1 Pfam PF01535 PPR Repeat 1106 1136 8.8e-251 794.3 PPR repeat
XP_057790740.1 Pfam PF13812 PPR_3 Repeat 1126 1184 3.2e-156 508.3 Pentatricopeptide repeat domain
XP_057790740.1 Pfam PF12854 PPR_1 Repeat 1135 1166 0 1126.0 PPR repeat
XP_057790740.1 Pfam PF13041 PPR_2 Repeat 1138 1185 0 1382.7 PPR repeat family
XP_057790740.1 Pfam PF01535 PPR Repeat 1141 1169 8.8e-251 794.3 PPR repeat
XP_057790740.1 Pfam PF13812 PPR_3 Repeat 1164 1218 3.2e-156 508.3 Pentatricopeptide repeat domain
XP_057790740.1 Pfam PF13041 PPR_2 Repeat 1173 1221 0 1382.7 PPR repeat family
XP_057790740.1 Pfam PF01535 PPR Repeat 1176 1203 8.8e-251 794.3 PPR repeat
XP_057790740.1 Pfam PF13812 PPR_3 Repeat 1196 1253 3.2e-156 508.3 Pentatricopeptide repeat domain
XP_057790740.1 Pfam PF12854 PPR_1 Repeat 1206 1237 0 1126.0 PPR repeat
XP_057790740.1 Pfam PF01535 PPR Repeat 1212 1241 8.8e-251 794.3 PPR repeat
XP_057790740.1 Pfam PF23276 TPR_24 Repeat 1213 1303 1.2e-75 252.5 Pentatricopeptide repeat-containing protein
XP_057790740.1 Pfam PF13812 PPR_3 Repeat 1232 1288 3.2e-156 508.3 Pentatricopeptide repeat domain
XP_057790740.1 Pfam PF12854 PPR_1 Repeat 1239 1270 0 1126.0 PPR repeat
XP_057790740.1 Pfam PF13041 PPR_2 Repeat 1243 1292 0 1382.7 PPR repeat family
XP_057790740.1 Pfam PF01535 PPR Repeat 1246 1276 8.8e-251 794.3 PPR repeat
XP_057790740.1 Pfam PF13812 PPR_3 Repeat 1267 1325 3.2e-156 508.3 Pentatricopeptide repeat domain
XP_057790740.1 Pfam PF12854 PPR_1 Repeat 1274 1305 0 1126.0 PPR repeat
XP_057790740.1 Pfam PF13041 PPR_2 Repeat 1278 1323 0 1382.7 PPR repeat family
XP_057790740.1 Pfam PF01535 PPR Repeat 1281 1307 8.8e-251 794.3 PPR repeat
XP_057790740.1 Pfam PF12854 PPR_1 Repeat 1309 1340 0 1126.0 PPR repeat
XP_057790740.1 Pfam PF13041 PPR_2 Repeat 1313 1357 0 1382.7 PPR repeat family
XP_057790740.1 Pfam PF01535 PPR Repeat 1316 1346 8.8e-251 794.3 PPR repeat
XP_057790740.1 Pfam PF23276 TPR_24 Repeat 1329 1444 1.2e-75 252.5 Pentatricopeptide repeat-containing protein
XP_057790740.1 Pfam PF13812 PPR_3 Repeat 1337 1395 3.2e-156 508.3 Pentatricopeptide repeat domain
XP_057790740.1 Pfam PF12854 PPR_1 Repeat 1344 1375 0 1126.0 PPR repeat
XP_057790740.1 Pfam PF13041 PPR_2 Repeat 1348 1397 0 1382.7 PPR repeat family
XP_057790740.1 Pfam PF01535 PPR Repeat 1351 1381 8.8e-251 794.3 PPR repeat
XP_057790740.1 Pfam PF12854 PPR_1 Repeat 1379 1410 0 1126.0 PPR repeat
XP_057790740.1 Pfam PF13041 PPR_2 Repeat 1384 1432 0 1382.7 PPR repeat family
XP_057790740.1 Pfam PF01535 PPR Repeat 1386 1416 8.8e-251 794.3 PPR repeat
XP_057790740.1 Pfam PF13812 PPR_3 Repeat 1408 1465 3.2e-156 508.3 Pentatricopeptide repeat domain
XP_057790740.1 Pfam PF12854 PPR_1 Repeat 1414 1445 0 1126.0 PPR repeat
XP_057790740.1 Pfam PF13041 PPR_2 Repeat 1419 1466 0 1382.7 PPR repeat family
XP_057790740.1 Pfam PF01535 PPR Repeat 1421 1451 8.8e-251 794.3 PPR repeat
XP_057790740.1 Pfam PF13812 PPR_3 Repeat 1442 1496 3.2e-156 508.3 Pentatricopeptide repeat domain
XP_057790740.1 Pfam PF12854 PPR_1 Repeat 1449 1482 0 1126.0 PPR repeat
XP_057790740.1 Pfam PF13041 PPR_2 Repeat 1453 1502 0 1382.7 PPR repeat family
XP_057790740.1 Pfam PF01535 PPR Repeat 1456 1486 8.8e-251 794.3 PPR repeat
XP_057790740.1 Pfam PF12854 PPR_1 Repeat 1484 1516 0 1126.0 PPR repeat
XP_057790740.1 Pfam PF13041 PPR_2 Repeat 1488 1532 0 1382.7 PPR repeat family
XP_057790740.1 Pfam PF01535 PPR Repeat 1491 1521 8.8e-251 794.3 PPR repeat

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

1 records

下载 cDNA FASTA
XM_057934757.1
CAATCAAATTAATCTGCTTTTGCACTTATCATCATACACATTTTTTATTCATCTCATCTCTTCGAAACCTTCTGCAAAATTATCGCATAAAAAGAAAAATACAGTGAGAATGTGGCGGAATCACGCTGCCATGATTTTGGGAAGAATTATCTCCAATTCTTCATTCAATTCATCCACTCTCCCCATTGCTTCGTTTCTTGTCAAACCCAGATTCAATTTTGATAATCTCACCCACCAAATTAAATACTTCTCCGCCTATC...

CDS

1 records

下载 CDS FASTA
LOC131007843
ATGTGGCGGAATCACGCTGCCATGATTTTGGGAAGAATTATCTCCAATTCTTCATTCAATTCATCCACTCTCCCCATTGCTTCGTTTCTTGTCAAACCCAGATTCAATTTTGATAATCTCACCCACCAAATTAAATACTTCTCCGCCTATCCCAGATTCGATTTTGGATCTATACGTGAGCCCAATGATGCCGTCGCTCTATTTGGGGAGATGGTGAGGACTCAACCACGCCCATATGTTACTGTTTTCAATAAATTGTT...

Protein

1 records

下载 Protein FASTA
XP_057790740.1
MWRNHAAMILGRIISNSSFNSSTLPIASFLVKPRFNFDNLTHQIKYFSAYPRFDFGSIREPNDAVALFGEMVRTQPRPYVTVFNKLLSVVVKMKQYSLGLHLFDEMLKRNAPVNHYTLSIAIDGCCRLKRPDFGFAILGIFFKRGYEPDVVTFNILVKGLLLVGRIPEAAKVLGKLSAFHLCEPNEYTYNTIINGLCKAGDILQAIELLCLLEKGKGSCKQPDVYAYNIVIDALCKEGKVDEALQLFSTLGDKGISPNIV...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

下载 upstream 下载 downstream 下载 upstream + gene + downstream

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