当前解析结果
SmilChr02G000329| 统一新 Gene ID | SmilChr02G000329 |
|---|---|
| 名称 | SmilChr02G000329 |
| 描述 | uncharacterized SmilChr02G000329 |
| 染色体 / SeqID | Chr02 / NC_080388.1 |
| 坐标与链方向 | 4201138 - 4202670 / - |
| NCBI Gene ID | LOC131007861 |
|---|---|
| GeneID | 131007861 |
| locus_tag | - |
| NCBI Name | LOC131007861 |
| 原始查询 | SmilChr02G000329 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | confidence=no_hit |
| 产物 | confidence=no_hit |
| Arabidopsis | -- |
| Rice | -- |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131007861 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Cytoplasm | 细胞质 | 1.00000 | XP_057790758.1 |
| 2 | Nucleus | 细胞核 | 0.80000 | XP_057790758.1 |
| 3 | Cytoplasmic granule | 细胞质颗粒 | 0.40000 | XP_057790758.1 |
| 4 | Cytoplasmic ribonucleoprotein granule | Cytoplasmic ribonucleoprotein granule | 0.40000 | XP_057790758.1 |
| 5 | P-body | P-body | 0.40000 | XP_057790758.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr2:4201151 |
A |
AT |
1bp_insertion | frameshift_variant | 55 | A14,A18,A20,A25,A4,A7,B106,B124,B125,B126,B132,B134,B14,B17,B29,B38,B39,B41,B44,B45,B55,B56,B57,B59,B65,B72,B79,B80,B83,B85,B90,B92,C21,C29,C30,C36,C39,C4,C43,C45,C53,C54,C55,C57,C59,C61,C70,C73,C76,C81,C82,C85,C87,D7,D9 |
Chr2:4201156 |
TC |
T |
1bp_deletion | frameshift_variant | 4 | B55,B56,B57,C82 |
Chr2:4201156 |
TC |
T |
1bp_deletion | CDS_variant | 4 | B55,B56,B57,C82 |
Chr2:4201189 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | B10,B74,C62,C7 |
Chr2:4201191 |
G |
A |
EMS_canonical_SNV | stop_gained | 6 | B136,B55,B56,B57,C82,D11 |
Chr2:4201194 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | D11 |
Chr2:4201198 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B66 |
Chr2:4201206 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B106,B47 |
Chr2:4201211 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | B10,B74,C62,C7 |
Chr2:4201243 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B10,B8,C62 |
Chr2:4201258 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | B103,B25,B66,B92 |
Chr2:4201263 |
G |
A |
EMS_canonical_SNV | stop_gained | 1 | B41 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。