当前解析结果
SmilChr02G000420| 统一新 Gene ID | SmilChr02G000420 |
|---|---|
| 名称 | SmilChr02G000420 |
| 描述 | uncharacterized SmilChr02G000420 |
| 染色体 / SeqID | Chr02 / NC_080388.1 |
| 坐标与链方向 | 5325009 - 5328111 / + |
| NCBI Gene ID | LOC131007887 |
|---|---|
| GeneID | 131007887 |
| locus_tag | - |
| NCBI Name | LOC131007887 |
| 原始查询 | SmilChr02G000420 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | heat shock protein 70 (Hsp 70) family protein [Source:NCBI gene (formerly Entrezgene);Acc:827367]; symbol=AT4G16660; hit=AT4G16660; species=arabidopsis; confidence=low |
| 产物 | heat shock protein 70 (Hsp 70) family protein [Source:NCBI gene (formerly Entrezgene);Acc:827367]; symbol=AT4G16660; hit=AT4G16660; species=arabidopsis; confidence=low |
| Arabidopsis | AT4G16660 (AT4G16660)heat shock protein 70 (Hsp 70) family protein [Source:NCBI gene (formerly Entrezgene);Acc:827367] identity=47.7; qcov=0.344; evalue=7.57e-17; confidence=low |
| Rice | Os02g0710900- identity=61.1; qcov=0.211; evalue=1.63e-14; confidence=weak |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131007887 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Cytoplasm | 细胞质 | 0.40000 | XP_057790782.1 |
| 2 | Endoplasmic reticulum | 内质网 | 0.40000 | XP_057790782.1 |
| 3 | Cytosol | 细胞质基质 | 0.20000 | XP_057790782.1 |
| 4 | Nucleus | 细胞核 | 0.00000 | XP_057790782.1 |
| 5 | Chromosome | 染色体 | 0.00000 | XP_057790782.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr2:5326056 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | A19,B26,C6 |
Chr2:5326076 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C58 |
Chr2:5326103 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | A19,B101 |
Chr2:5326106 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B93 |
Chr2:5326125 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | A25,C29 |
Chr2:5326126 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | A19,B101 |
Chr2:5326146 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B5 |
Chr2:5326148 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B65,C53,D11 |
Chr2:5326196 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B54 |
Chr2:5326218 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B102,B55 |
Chr2:5326223 |
T |
TC |
1bp_insertion | frameshift_variant | 1 | C20 |
Chr2:5326223 |
T |
TC |
1bp_insertion | CDS_variant | 1 | C20 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。