当前解析结果
SmilChr02G000642| 统一新 Gene ID | SmilChr02G000642 |
|---|---|
| 名称 | SmilChr02G000642 |
| 描述 | uncharacterized SmilChr02G000642 |
| 染色体 / SeqID | Chr02 / NC_080388.1 |
| 坐标与链方向 | 9710580 - 9716954 / + |
| NCBI Gene ID | LOC131007970 |
|---|---|
| GeneID | 131007970 |
| locus_tag | - |
| NCBI Name | LOC131007970 |
| 原始查询 | SmilChr02G000642 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | FAD/NAD(P)-binding oxidoreductase family protein [Source:NCBI gene (formerly Entrezgene);Acc:831004]; symbol=AT5G11330; hit=AT5G11330; species=arabidopsis; confidence=high |
| 产物 | FAD/NAD(P)-binding oxidoreductase family protein [Source:NCBI gene (formerly Entrezgene);Acc:831004]; symbol=AT5G11330; hit=AT5G11330; species=arabidopsis; confidence=high |
| Arabidopsis | AT5G11330 (AT5G11330)FAD/NAD(P)-binding oxidoreductase family protein [Source:NCBI gene (formerly Entrezgene);Acc:831004] identity=55.7; qcov=0.869; evalue=7.93e-72; confidence=high |
| Rice | Os06g0597600- identity=48.3; qcov=0.817; evalue=1.56e-48; confidence=medium |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131007970 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Cytoplasm | 细胞质 | 0.60000 | XP_057790860.1 |
| 2 | Cytosol | 细胞质基质 | 0.40000 | XP_057790860.1 |
| 3 | Peroxisome | 过氧化物酶体 | 0.20000 | XP_057790860.1 |
| 4 | Nucleus | 细胞核 | 0.00000 | XP_057790860.1 |
| 5 | Chromosome | 染色体 | 0.00000 | XP_057790860.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr2:9715286 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B95,C14 |
Chr2:9715292 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | A16,B114,C32,C43,C51 |
Chr2:9715302 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | A21,B121,B76,C45 |
Chr2:9715328 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B40,C78,D5 |
Chr2:9715343 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | A16,B114,C32 |
Chr2:9715352 |
T |
TA |
1bp_insertion | frameshift_variant | 1 | B49 |
Chr2:9715352 |
T |
TA |
1bp_insertion | CDS_variant | 1 | B49 |
Chr2:9715370 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B40,C78,D5 |
Chr2:9715382 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | A14,B42 |
Chr2:9715391 |
G |
A |
EMS_canonical_SNV | stop_gained | 1 | A19 |
Chr2:9715391 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | A19 |
Chr2:9715409 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B111 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。