当前解析结果
SmilChr02G000753| 统一新 Gene ID | SmilChr02G000753 |
|---|---|
| 名称 | SmilChr02G000753 |
| 描述 | uncharacterized membrane protein At1g16860-like |
| 染色体 / SeqID | Chr02 / NC_080388.1 |
| 坐标与链方向 | 12271672 - 12277517 / + |
| NCBI Gene ID | LOC131011232 |
|---|---|
| GeneID | 131011232 |
| locus_tag | - |
| NCBI Name | LOC131011232 |
| 原始查询 | SmilChr02G000753 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | Ubiquitin-specific protease family C19-related protein [Source:NCBI gene (formerly Entrezgene);Acc:828324]; symbol=AT4G22290; hit=AT4G22290; species=arabidopsis; confidence=high |
| 产物 | Ubiquitin-specific protease family C19-related protein [Source:NCBI gene (formerly Entrezgene);Acc:828324]; symbol=AT4G22290; hit=AT4G22290; species=arabidopsis; confidence=high |
| Arabidopsis | AT4G22290 (AT4G22290)Ubiquitin-specific protease family C19-related protein [Source:NCBI gene (formerly Entrezgene);Acc:828324] identity=53.5; qcov=1.07; evalue=1.16e-153; confidence=high |
| Rice | Os08g0230200- identity=42.8; qcov=1.14; evalue=7.72e-118; confidence=medium |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131011232 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus membrane | 核膜 | 0.60000 | XP_057794999.1 |
| 2 | Endoplasmic reticulum | 内质网 | 0.40000 | XP_057794999.1 |
| 3 | Endoplasmic reticulum membrane | 内质网膜 | 0.20000 | XP_057794999.1 |
| 4 | Nucleus | 细胞核 | 0.00000 | XP_057794999.1 |
| 5 | Chromosome | 染色体 | 0.00000 | XP_057794999.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr2:12272913 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | C78,D5 |
Chr2:12272941 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | B71,B88,B98,C62 |
Chr2:12272966 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B112,B77 |
Chr2:12272996 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B102,C76 |
Chr2:12273040 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | A16,C30 |
Chr2:12273215 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B51,B65,B89 |
Chr2:12273406 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B51,B65,B89 |
Chr2:12273441 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C17 |
Chr2:12274674 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B102,C76 |
Chr2:12274752 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | B71,B88,B98,C62 |
Chr2:12275312 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B11,D10 |
Chr2:12276126 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B112,B77 |
每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
2 records
下载 cDNA FASTA2 records
下载 CDS FASTA2 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。