当前解析结果
SmilChr02G000853| 统一新 Gene ID | SmilChr02G000853 |
|---|---|
| 名称 | SmilChr02G000853 |
| 描述 | uncharacterized SmilChr02G000853 |
| 染色体 / SeqID | Chr02 / NC_080388.1 |
| 坐标与链方向 | 14530150 - 14530911 / + |
| NCBI Gene ID | LOC131008028 |
|---|---|
| GeneID | 131008028 |
| locus_tag | - |
| NCBI Name | LOC131008028 |
| 原始查询 | SmilChr02G000853 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | hit=Os12g0292200; species=rice; confidence=low |
| 产物 | hit=Os12g0292200; species=rice; confidence=low |
| Arabidopsis | -- |
| Rice | Os12g0292200- identity=26.4; qcov=0.36; evalue=1.97e-06; confidence=low |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131008028 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus | 细胞核 | 0.80000 | XP_057790915.1 |
| 2 | Cytoplasm | 细胞质 | 0.80000 | XP_057790915.1 |
| 3 | Chromosome | 染色体 | 0.00000 | XP_057790915.1 |
| 4 | Centromere | 着丝粒 | 0.00000 | XP_057790915.1 |
| 5 | Chromatin | 染色质 | 0.00000 | XP_057790915.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr2:14530168 |
C |
T |
EMS_canonical_SNV | stop_gained | 1 | B132 |
Chr2:14530168 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B132 |
Chr2:14530171 |
C |
T |
EMS_canonical_SNV | stop_gained | 35 | A19,A3,A5,B1,B104,B108,B110,B113,B117,B124,B134,B21,B27,B28,B44,B5,B50,B51,B57,B62,B71,B74,B94,C11,C25,C26,C30,C31,C37,C38,C48,C69,C73,C80,C83 |
Chr2:14530173 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | B104,B11,B23,C45 |
Chr2:14530180 |
C |
T |
EMS_canonical_SNV | stop_gained | 1 | B132 |
Chr2:14530180 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B132 |
Chr2:14530196 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B132 |
Chr2:14530198 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | A24,B50,B66,C39 |
Chr2:14530201 |
C |
T |
EMS_canonical_SNV | stop_gained | 2 | B132,C65 |
Chr2:14530201 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B132,C65 |
Chr2:14530203 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | A4,B41,B49,B99,D4 |
Chr2:14530207 |
C |
T |
EMS_canonical_SNV | stop_gained | 21 | A3,B109,B11,B114,B120,B125,B138,B45,B46,B48,B54,B57,B83,B88,B91,B93,C15,C51,C54,C57,C77 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。