当前解析结果
SmilChr02G000862| 统一新 Gene ID | SmilChr02G000862 |
|---|---|
| 名称 | SmilChr02G000862 |
| 描述 | uncharacterized SmilChr02G000862 |
| 染色体 / SeqID | Chr02 / NC_080388.1 |
| 坐标与链方向 | 14806134 - 14806589 / + |
| NCBI Gene ID | LOC131008034 |
|---|---|
| GeneID | 131008034 |
| locus_tag | - |
| NCBI Name | LOC131008034 |
| 原始查询 | SmilChr02G000862 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | confidence=no_hit |
| 产物 | confidence=no_hit |
| Arabidopsis | -- |
| Rice | -- |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131008034 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus | 细胞核 | 0.60000 | XP_057790921.1 |
| 2 | Cytoplasm | 细胞质 | 0.40000 | XP_057790921.1 |
| 3 | Endoplasmic reticulum | 内质网 | 0.20000 | XP_057790921.1 |
| 4 | Chromosome | 染色体 | 0.00000 | XP_057790921.1 |
| 5 | Centromere | 着丝粒 | 0.00000 | XP_057790921.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr2:14806145 |
T |
TTC |
2bp_insertion | frameshift_variant | 1 | C29 |
Chr2:14806145 |
T |
TTC |
2bp_insertion | CDS_variant | 1 | C29 |
Chr2:14806146 |
G |
GCC |
2bp_insertion | frameshift_variant | 167 | A1,A10,A11,A13,A15,A18,A19,A20,A21,A22,A23,A3,A4,A5,A7,A8,A9,B100,B101,B102,B103,B104,B105,B106,B107,B109,B110,B112,B113,B114,B115,B117,B118,B119,B12,B120,B121,B122,B123,B124,B125,B126,B128,B129,B13,B130,B131,B132,B136,B138,B139,B14,B15,B16,B19,B2,B20,B21,B22,B24,B25,B27,B28,B3,B30,B33,B36,B41,B42,B44,B45,B48,B50,B51,B54,B55,B56,B57,B58,B59,B6,B60,B62,B63,B64,B65,B66,B68,B69,B72,B73,B74,B76,B77,B81,B84,B85,B86,B88,B9,B90,B92,B94,B95,B96,C1,C10,C11,C12,C14,C15,C18,C19,C21,C22,C23,C24,C25,C26,C28,C30,C31,C32,C34,C37,C39,C4,C40,C41,C43,C44,C45,C46,C48,C49,C5,C50,C53,C55,C58,C59,C61,C63,C64,C69,C7,C70,C71,C72,C75,C77,C78,C8,C80,C81,C82,C83,C84,C86,C87,C9,D1,D10,D3,D5,D6,D7 |
Chr2:14806151 |
AC |
A |
1bp_deletion | frameshift_variant | 4 | B137,B5,B67,C12 |
Chr2:14806151 |
AC |
A |
1bp_deletion | CDS_variant | 4 | B137,B5,B67,C12 |
Chr2:14806175 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | B105,B44,B45,B50 |
Chr2:14806194 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | D11 |
Chr2:14806242 |
C |
T |
EMS_canonical_SNV | stop_gained | 20 | A21,A25,B131,B27,B36,B83,B87,B89,B94,C17,C21,C30,C43,C51,C58,C6,C7,C74,C77,C87 |
Chr2:14806250 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C19 |
Chr2:14806295 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C12 |
Chr2:14806296 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | B85,C36,C8,C86 |
Chr2:14806301 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | B108,B130,C45,C46,C63 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。