当前解析结果
SmilChr02G000886| 统一新 Gene ID | SmilChr02G000886 |
|---|---|
| 名称 | SmilChr02G000886 |
| 描述 | uncharacterized mitochondrial protein AtMg00860-like |
| 染色体 / SeqID | Chr02 / NC_080388.1 |
| 坐标与链方向 | 15266792 - 15267130 / + |
| NCBI Gene ID | LOC131008044 |
|---|---|
| GeneID | 131008044 |
| locus_tag | - |
| NCBI Name | LOC131008044 |
| 原始查询 | SmilChr02G000886 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | hit=Os08g0202300; species=rice; confidence=low |
| 产物 | hit=Os08g0202300; species=rice; confidence=low |
| Arabidopsis | ATMG00860- identity=37; qcov=0.893; evalue=1.84e-17; confidence=low |
| Rice | Os08g0202300- identity=36.2; qcov=0.938; evalue=1.46e-20; confidence=low |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131008044 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Cytoplasm | 细胞质 | 1.00000 | XP_057790929.1 |
| 2 | Nucleus | 细胞核 | 0.60000 | XP_057790929.1 |
| 3 | Chromosome | 染色体 | 0.00000 | XP_057790929.1 |
| 4 | Centromere | 着丝粒 | 0.00000 | XP_057790929.1 |
| 5 | Chromatin | 染色质 | 0.00000 | XP_057790929.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr2:15266799 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B93 |
Chr2:15266802 |
AG |
A |
1bp_deletion | frameshift_variant | 6 | B23,B4,B50,B66,C27,C44 |
Chr2:15266808 |
T |
TTG |
2bp_insertion | frameshift_variant | 8 | B102,B71,B72,B98,C10,C62,C8,D7 |
Chr2:15266821 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B40 |
Chr2:15266846 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | D8 |
Chr2:15266862 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B104,D11,D8 |
Chr2:15266863 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | B33,B46,B82,C60 |
Chr2:15266886 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | A1,A23,B98,C55 |
Chr2:15266895 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C28 |
Chr2:15266908 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B42 |
Chr2:15266909 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B93 |
Chr2:15266911 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B42 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。