Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr02G001083`

染色体: Chr02 坐标: 19386203-19392105 链方向: + 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr02G001083`
名称	SmilChr02G001083
描述	uncharacterized SmilChr02G001083
染色体 / SeqID	Chr02 / NC_080388.1
坐标与链方向	19386203 - 19392105 / `+`

ID 对照

NCBI Gene ID	`LOC131011485`
GeneID	`131011485`
locus_tag	`-`
NCBI Name	`LOC131011485`
原始查询	`SmilChr02G001083`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; Arabidopsis/Rice homolog
描述	chromosome-partitioning protein, putative (DUF639) [Source:NCBI gene (formerly Entrezgene);Acc:843465]; symbol=AT1G71240; hit=AT1G71240; species=arabidopsis; confidence=high
产物	chromosome-partitioning protein, putative (DUF639) [Source:NCBI gene (formerly Entrezgene);Acc:843465]; symbol=AT1G71240; hit=AT1G71240; species=arabidopsis; confidence=high
Arabidopsis	`AT1G71240` (AT1G71240) chromosome-partitioning protein, putative (DUF639) [Source:NCBI gene (formerly Entrezgene);Acc:843465] identity=55.5; qcov=0.624; evalue=5.47e-57; confidence=high
Rice	`Os01g0869000` (P0677H08.27-3) - identity=54.6; qcov=0.62; evalue=1.26e-52; confidence=high
GO	-
KEGG	-
Pfam	-
InterPro	-
eggNOG	-
NR	GeneID:131011485

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Cytosol	细胞质基质	1.00000	`XP_057795261.1`
2	Endoplasmic reticulum	内质网	0.80000	`XP_057795259.1`
3	Cytoplasm	细胞质	0.60000	`XP_057795261.1`
4	Endoplasmic reticulum membrane	内质网膜	0.40000	`XP_057795259.1`
5	Lipid droplet	脂滴	0.20000	`XP_057795260.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr2:19387319`	`G`	`GT`	1bp_insertion	frameshift_variant	16	A20,A6,B1,B114,B129,B29,B33,B50,B57,B65,B67,B74,B89,B90,C6,C7
`Chr2:19387365`	`C`	`T`	EMS_canonical_SNV	CDS_variant	3	B111,B138,C87
`Chr2:19387367`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B78
`Chr2:19387379`	`G`	`A`	EMS_canonical_SNV	CDS_variant	2	B21,C55
`Chr2:19387395`	`C`	`T`	EMS_canonical_SNV	CDS_variant	3	B37,B68,C32
`Chr2:19387429`	`TA`	`T`	1bp_deletion	frameshift_variant	10	A1,A15,A16,B130,B19,B2,B62,B85,C86,D6
`Chr2:19387439`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B65
`Chr2:19388978`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	C75
`Chr2:19389535`	`CT`	`C`	1bp_deletion	frameshift_variant	1	D2
`Chr2:19389535`	`CT`	`C`	1bp_deletion	CDS_variant	1	D2
`Chr2:19391192`	`AG`	`A`	1bp_deletion	frameshift_variant	1	A5
`Chr2:19391192`	`AG`	`A`	1bp_deletion	CDS_variant	1	A5

进入 EMS 突变库

预测功能结构域

当前发布数据中，此基因没有可展示的 Pfam 结构域命中。

进入结构域查询

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

4 records

下载 cDNA FASTA

XR_009096949.1
CTATTTGGGTGTTTTGAGAATTTGTTGTGAGAATTTGCACTTATAAATTTGTCTATTTTTTCTTTTTCTCTTTCTACATTCTCTGTATTTTTTTATACAATTTTGTCTGGATTTGAACTTGAAGCCCTCCGAAAATAAGTTTCTGTCAACGCTGCTCCTGCCGTCAATTGCTTTTTCTGATTTTGCGAGATGATTTTATTCATTTAGCTAGCACTCATGCATCCATCATTCAATTCATCCTTTGTACAGTGACTTGTTTG...

XM_057939276.1
AATTCCAAAGCTTTCGTTCCAAAATCCCCTATTCACCAAATCATCTTTTTCTTCACATTAATTTCACCAAAATCCCCAAATCACCAAATCTATTTGCAAAAAAAAATTGTAAGTGTGAAATTGCTACTCCCTTTCGCATCTAGCTTCCACCAAATTCTCGAACCCTTGTCGCCGCCCCAACTTTCTCCAACCGCCGCTCCAGCCTTTCCTGGCCACCGTCGGCTCGCCCCGCCGCCGTCGGGTCGCCCTGCCCTGTCTCC...

CDS

3 records

下载 CDS FASTA

LOC131011485
ATGCACCTGTTGCCTTATTCTGCTTCTTCATTGATCTGTTTGTGCTTCATTGGAGCTGTAATGAGTTATAGAATGTATATCTATTCTTATTGTTATGTTCTTTTTTCTGGGTGCTCAACTGCTGCATATAAAGGAAAGCGTGCAGCAGCATTGGCAGCTTGTAGGACGTTGGCTGAAGATCCAACCAAGCTGTGTTTTCCAGCTACTAAGATTGTTGCATTTAAGGAACCTGCATTTCGGAGACTAATTTTTATAACTAT...

Protein

3 records

下载 Protein FASTA

XP_057795259.1
MHLLPYSASSLICLCFIGAVMSYRMYIYSYCYVLFSGCSTAAYKGKRAAALAACRTLAEDPTKLCFPATKIVAFKEPAFRRLIFITMLAWENPLRKGKGNRVKLFKGSNFQKKLVGEEAFVRIAPVVSGVADCPTAHNLFRALAGEEKGVSFSIWSTYITELVKVHEGRKSYQFQDISQFPKEKILCLGSSRKQPVLKWENDMAWPGKVTLTDRALYFEAASLVGGKDVVRLDLTHHNSRVEKTRVGPYLTLQSPSHLVR...

XP_057795260.1
MHLLPYSASSLICLCFIGAVMSYRMYIYSYCYVLFSGCSTAAYKGKRAAALAACRTLAEDPTKLCFPATKIVAFKEPAFRRLIFITMLAWENPLRKGKGNRVKLFKGSNFQKLVGEEAFVRIAPVVSGVADCPTAHNLFRALAGEEKGVSFSIWSTYITELVKVHEGRKSYQFQDISQFPKEKILCLGSSRKQPVLKWENDMAWPGKVTLTDRALYFEAASLVGGKDVVRLDLTHHNSRVEKTRVGPYLTLQSPSHLVRS...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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