当前解析结果
SmilChr02G001121| 统一新 Gene ID | SmilChr02G001121 |
|---|---|
| 名称 | SmilChr02G001121 |
| 描述 | uncharacterized SmilChr02G001121 |
| 染色体 / SeqID | Chr02 / NC_080388.1 |
| 坐标与链方向 | 20206755 - 20208900 / - |
| NCBI Gene ID | LOC131008112 |
|---|---|
| GeneID | 131008112 |
| locus_tag | - |
| NCBI Name | LOC131008112 |
| 原始查询 | SmilChr02G001121 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | hit=Os12g0292200; species=rice; confidence=weak |
| 产物 | hit=Os12g0292200; species=rice; confidence=weak |
| Arabidopsis | -- |
| Rice | Os12g0292200- identity=28.4; qcov=0.149; evalue=1.43e-07; confidence=weak |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131008112 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Cytoplasm | 细胞质 | 1.00000 | XP_057790993.1 |
| 2 | Nucleus | 细胞核 | 0.60000 | XP_057790993.1 |
| 3 | Cytoplasmic granule | 细胞质颗粒 | 0.40000 | XP_057790993.1 |
| 4 | Cytosol | 细胞质基质 | 0.40000 | XP_057790993.1 |
| 5 | Cytoplasmic ribonucleoprotein granule | Cytoplasmic ribonucleoprotein granule | 0.20000 | XP_057790993.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr2:20207139 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B108,B122 |
Chr2:20207162 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B122,B13 |
Chr2:20207181 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B108,C7 |
Chr2:20207209 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | A11,B62 |
Chr2:20207211 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | A11 |
Chr2:20207249 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | B124,B49,C42,C55 |
Chr2:20207291 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | B119,B42,C38,C43 |
Chr2:20207303 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | A16,C70,D7 |
Chr2:20207386 |
AT |
A |
1bp_deletion | frameshift_variant | 3 | B10,B95,C27 |
Chr2:20207386 |
AT |
A |
1bp_deletion | CDS_variant | 3 | B10,B95,C27 |
Chr2:20207411 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | A11,B54 |
Chr2:20207499 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B1,B94 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。